Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NUP35Q8NFH5 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 AC073621.1-201ENST00000392730 636 ntBASIC11.54□□□□□ -0.56
NUP35Q8NFH5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 KRT18P27-201ENST00000427733 1299 ntBASIC11.54□□□□□ -0.56
NUP35Q8NFH5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.54□□□□□ -0.56
NUP35Q8NFH5 AC136632.2-201ENST00000512891 861 ntBASIC11.54□□□□□ -0.56
NUP35Q8NFH5 PRYP6-201ENST00000514804 343 ntBASIC11.54□□□□□ -0.56
NUP35Q8NFH5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 AC025062.2-201ENST00000605477 670 ntBASIC11.54□□□□□ -0.56
NUP35Q8NFH5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.54□□□□□ -0.56
NUP35Q8NFH5 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 TMPOP1-202ENST00000424642 1267 ntBASIC11.53□□□□□ -0.56
NUP35Q8NFH5 FGFR3P6-201ENST00000457012 610 ntBASIC11.53□□□□□ -0.56
NUP35Q8NFH5 TPT1P11-201ENST00000458482 498 ntBASIC11.53□□□□□ -0.56
NUP35Q8NFH5 SCARNA2-201ENST00000458748 420 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms