Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC170Q8IYT3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC170Q8IYT3 AC006504.5-208ENST00000588784 2401 ntBASIC16.55■□□□□ 0.24
CCDC170Q8IYT3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC170Q8IYT3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC170Q8IYT3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC170Q8IYT3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC170Q8IYT3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC170Q8IYT3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 AL079307.3-201ENST00000556114 283 ntBASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 ELL2P1-201ENST00000413990 1906 ntBASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 SBF1P1-201ENST00000444527 5631 ntBASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC170Q8IYT3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 AC041040.2-201ENST00000622926 2899 ntBASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 KRT18P64-201ENST00000434946 1219 ntBASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 AP001267.2-201ENST00000532619 2086 ntBASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC170Q8IYT3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms