Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 AC005730.2-201ENST00000564549 1184 ntBASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 AC073413.1-201ENST00000603927 732 ntBASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 AC091812.3-201ENST00000621362 345 ntBASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 LINC02447-202ENST00000501888 2146 ntBASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEFF1Q8IYR6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 KRT8P14-201ENST00000414254 1442 ntBASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 RN7SL720P-201ENST00000488178 304 ntBASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 AL391280.1-201ENST00000506969 1062 ntBASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 MIR4706-201ENST00000582134 82 ntBASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 MIR6727-201ENST00000620702 65 ntBASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEFF1Q8IYR6 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 PAUPAR-201ENST00000630360 2965 ntBASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 AL513523.2-202ENST00000427283 2040 ntBASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 AL645937.2-201ENST00000396808 931 ntBASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 EIF3FP3-201ENST00000434851 1086 ntBASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 Z97180.1-201ENST00000445173 988 ntBASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 RN7SL11P-201ENST00000471305 293 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms