Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 RN7SL752P-201ENST00000463779 287 ntBASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 SAMD11P1-201ENST00000571429 661 ntBASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 CU634019.7-201ENST00000624153 1185 ntBASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 FP236241.2-201ENST00000624906 1185 ntBASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SCUBE3Q8IX30 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 REXO1L4P-201ENST00000605109 1937 ntBASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 AC098614.1-201ENST00000368528 745 ntBASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 AC245100.3-201ENST00000441281 285 ntBASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 AP001582.1-201ENST00000525856 295 ntBASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 ENPP7P5-201ENST00000541031 1031 ntBASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.16■□□□□ 0.18
SCUBE3Q8IX30 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 GPR53P-205ENST00000457298 1084 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms