Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.01□□□□□ -0.17
CROCCP3Q8IVE0 KRT8P24-201ENST00000560290 1559 ntBASIC14□□□□□ -0.17
CROCCP3Q8IVE0 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 AC016734.2-201ENST00000624325 1377 ntBASIC14□□□□□ -0.17
CROCCP3Q8IVE0 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 TOB2P1-201ENST00000469761 992 ntBASIC14□□□□□ -0.17
CROCCP3Q8IVE0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 TPSP2-201ENST00000561760 610 ntBASIC14□□□□□ -0.17
CROCCP3Q8IVE0 MIR3909-201ENST00000579518 119 ntBASIC14□□□□□ -0.17
CROCCP3Q8IVE0 AC004706.3-202ENST00000621574 984 ntBASIC14□□□□□ -0.17
CROCCP3Q8IVE0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 AC068760.1-201ENST00000493579 1953 ntBASIC14□□□□□ -0.17
CROCCP3Q8IVE0 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CROCCP3Q8IVE0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 AC005521.1-201ENST00000393351 872 ntBASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 AC093724.1-201ENST00000448659 1027 ntBASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CROCCP3Q8IVE0 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms