Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM50Q86XT4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 AL365203.3-201ENST00000609742 2057 ntBASIC17.09■□□□□ 0.33
TRIM50Q86XT4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 CICP11-201ENST00000434745 2827 ntBASIC17.09■□□□□ 0.33
TRIM50Q86XT4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 EIF3FP3-201ENST00000434851 1086 ntBASIC17.09■□□□□ 0.33
TRIM50Q86XT4 GOLGA2P4-201ENST00000441462 777 ntBASIC17.09■□□□□ 0.33
TRIM50Q86XT4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 ZNF767P-206ENST00000513792 565 ntBASIC17.09■□□□□ 0.33
TRIM50Q86XT4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.09■□□□□ 0.33
TRIM50Q86XT4 KRT8P44-201ENST00000441609 1350 ntBASIC17.09■□□□□ 0.33
TRIM50Q86XT4 KRT8P14-201ENST00000414254 1442 ntBASIC17.09■□□□□ 0.33
TRIM50Q86XT4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM50Q86XT4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM50Q86XT4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM50Q86XT4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.08■□□□□ 0.33
TRIM50Q86XT4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TRIM50Q86XT4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
TRIM50Q86XT4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TRIM50Q86XT4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.08■□□□□ 0.33
TRIM50Q86XT4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TRIM50Q86XT4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM50Q86XT4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.08■□□□□ 0.33
TRIM50Q86XT4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM50Q86XT4 AC068587.6-202ENST00000641839 5619 ntBASIC17.08■□□□□ 0.33
TRIM50Q86XT4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM50Q86XT4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM50Q86XT4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM50Q86XT4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 NUS1P3-201ENST00000423502 862 ntBASIC17.08■□□□□ 0.32
TRIM50Q86XT4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 AC243960.2-201ENST00000600996 747 ntBASIC17.08■□□□□ 0.32
TRIM50Q86XT4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 AC091271.1-201ENST00000611877 1162 ntBASIC17.08■□□□□ 0.32
TRIM50Q86XT4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 AC008741.2-201ENST00000612792 3115 ntBASIC17.08■□□□□ 0.32
TRIM50Q86XT4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.32
TRIM50Q86XT4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms