Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 AC007292.2-201ENST00000593524 1812 ntBASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 OR10B1P-201ENST00000601666 907 ntBASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 DGAT2L7P-201ENST00000602462 744 ntBASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 AC136621.1-201ENST00000624017 2304 ntBASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS13BQ7Z7G8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 AQP7P5-201ENST00000428759 1049 ntBASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 AQP7P4-201ENST00000447083 1042 ntBASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 LYPLA2P1-203ENST00000447689 696 ntBASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 AQP7P2-201ENST00000453967 1041 ntBASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 AC084781.1-201ENST00000613737 656 ntBASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 AQP7P3-201ENST00000624547 1041 ntBASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 CMC2-224ENST00000630396 481 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 LINC00431-202ENST00000636375 159 ntBASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13BQ7Z7G8 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 NDUFAB1P1-201ENST00000404262 460 ntBASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 DDX39AP1-201ENST00000445147 1181 ntBASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 AC026803.1-201ENST00000569130 274 ntBASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 ETV2-207ENST00000619399 994 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13BQ7Z7G8 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms