Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS6Q7L5N1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS6Q7L5N1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS6Q7L5N1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS6Q7L5N1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.24■□□□□ 0.67
COPS6Q7L5N1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS6Q7L5N1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS6Q7L5N1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC19.24■□□□□ 0.67
COPS6Q7L5N1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS6Q7L5N1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 C18orf15-201ENST00000623680 2534 ntBASIC19.23■□□□□ 0.67
COPS6Q7L5N1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 AC012508.2-201ENST00000567613 1472 ntBASIC19.23■□□□□ 0.67
COPS6Q7L5N1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.23■□□□□ 0.67
COPS6Q7L5N1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 CHMP1AP1-201ENST00000445563 662 ntBASIC19.23■□□□□ 0.67
COPS6Q7L5N1 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 AP001258.2-201ENST00000529891 490 ntBASIC19.23■□□□□ 0.67
COPS6Q7L5N1 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.23■□□□□ 0.67
COPS6Q7L5N1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS6Q7L5N1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 ZACNP1-201ENST00000612259 710 ntBASIC19.22■□□□□ 0.67
COPS6Q7L5N1 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 AC244157.2-201ENST00000616239 1006 ntBASIC19.22■□□□□ 0.67
COPS6Q7L5N1 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 SSR4P1-203ENST00000599569 2260 ntBASIC19.22■□□□□ 0.67
COPS6Q7L5N1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COPS6Q7L5N1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS6Q7L5N1 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms