Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 RN7SL828P-201ENST00000607615 303 ntBASIC15.54■□□□□ 0.08
RAPH1Q70E73 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAPH1Q70E73 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.54■□□□□ 0.08
RAPH1Q70E73 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 MROH4P-201ENST00000431302 1578 ntBASIC15.53■□□□□ 0.08
RAPH1Q70E73 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 C8orf49-201ENST00000525043 1968 ntBASIC15.53■□□□□ 0.08
RAPH1Q70E73 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 AL035456.1-201ENST00000456064 1369 ntBASIC15.53■□□□□ 0.08
RAPH1Q70E73 FGD5P1-202ENST00000614866 2498 ntBASIC15.53■□□□□ 0.08
RAPH1Q70E73 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 MIR3687-2-201ENST00000577708 61 ntBASIC15.53■□□□□ 0.08
RAPH1Q70E73 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 MIR3687-1-201ENST00000614492 61 ntBASIC15.53■□□□□ 0.08
RAPH1Q70E73 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.53■□□□□ 0.08
RAPH1Q70E73 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.53■□□□□ 0.08
RAPH1Q70E73 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 AL390755.1-201ENST00000623716 2027 ntBASIC15.53■□□□□ 0.08
RAPH1Q70E73 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAPH1Q70E73 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RAPH1Q70E73 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.52■□□□□ 0.08
RAPH1Q70E73 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RAPH1Q70E73 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RAPH1Q70E73 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms