Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 ELL2P1-201ENST00000413990 1906 ntBASIC13.54□□□□□ -0.24
C11orf88Q6PI97 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 AC105250.1-201ENST00000509378 2057 ntBASIC13.54□□□□□ -0.24
C11orf88Q6PI97 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 LINC01230-201ENST00000625222 3017 ntBASIC13.54□□□□□ -0.24
C11orf88Q6PI97 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 AC074386.1-202ENST00000463561 864 ntBASIC13.54□□□□□ -0.24
C11orf88Q6PI97 CXCL1P1-201ENST00000502804 216 ntBASIC13.54□□□□□ -0.24
C11orf88Q6PI97 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 MIR4469-201ENST00000583919 79 ntBASIC13.54□□□□□ -0.24
C11orf88Q6PI97 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 BCAR1-209ENST00000546196 1340 ntBASIC13.54□□□□□ -0.24
C11orf88Q6PI97 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.54□□□□□ -0.24
C11orf88Q6PI97 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.53□□□□□ -0.24
C11orf88Q6PI97 SLC25A6P2-201ENST00000497974 877 ntBASIC13.53□□□□□ -0.24
C11orf88Q6PI97 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms