Protein–RNA interactions for Protein: Q15012

LAPTM4A, Lysosomal-associated transmembrane protein 4A, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4AQ15012 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 MIR346-201ENST00000362234 95 ntBASIC14.45□□□□□ -0.1
LAPTM4AQ15012 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 SPCS2P4-201ENST00000436160 681 ntBASIC14.45□□□□□ -0.1
LAPTM4AQ15012 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 AC079140.1-201ENST00000508039 487 ntBASIC14.45□□□□□ -0.1
LAPTM4AQ15012 PGAM5P1-201ENST00000518923 814 ntBASIC14.45□□□□□ -0.1
LAPTM4AQ15012 KRT18P58-201ENST00000527480 1120 ntBASIC14.45□□□□□ -0.1
LAPTM4AQ15012 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.45□□□□□ -0.1
LAPTM4AQ15012 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 BX640514.1-201ENST00000583223 1918 ntBASIC14.45□□□□□ -0.1
LAPTM4AQ15012 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAPTM4AQ15012 AC027601.5-201ENST00000624065 2482 ntBASIC14.44□□□□□ -0.1
LAPTM4AQ15012 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 AC006504.5-208ENST00000588784 2401 ntBASIC14.44□□□□□ -0.1
LAPTM4AQ15012 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 AL691447.1-201ENST00000419456 387 ntBASIC14.44□□□□□ -0.1
LAPTM4AQ15012 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 ADH5P3-201ENST00000433842 1137 ntBASIC14.44□□□□□ -0.1
LAPTM4AQ15012 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 COA4-204ENST00000541455 1038 ntTSL 5 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 AP000842.3-202ENST00000569238 1080 ntBASIC14.44□□□□□ -0.1
LAPTM4AQ15012 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 AC018529.2-202ENST00000611482 3087 ntBASIC14.44□□□□□ -0.1
LAPTM4AQ15012 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms