Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSBP1Q04837 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.03□□□□□ -0.32
SSBP1Q04837 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP1Q04837 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP1Q04837 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.03□□□□□ -0.32
SSBP1Q04837 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP1Q04837 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP1Q04837 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP1Q04837 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.03□□□□□ -0.32
SSBP1Q04837 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP1Q04837 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP1Q04837 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP1Q04837 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.03□□□□□ -0.32
SSBP1Q04837 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP1Q04837 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SSBP1Q04837 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SSBP1Q04837 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP1Q04837 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP1Q04837 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP1Q04837 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SSBP1Q04837 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.03□□□□□ -0.32
SSBP1Q04837 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP1Q04837 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP1Q04837 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
SSBP1Q04837 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.03□□□□□ -0.32
SSBP1Q04837 AC022447.6-201ENST00000515522 438 ntBASIC13.03□□□□□ -0.32
SSBP1Q04837 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.03□□□□□ -0.32
SSBP1Q04837 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.03□□□□□ -0.32
SSBP1Q04837 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.03□□□□□ -0.32
SSBP1Q04837 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.03□□□□□ -0.32
SSBP1Q04837 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.03□□□□□ -0.32
SSBP1Q04837 IFNL4P1-201ENST00000607083 540 ntBASIC13.03□□□□□ -0.32
SSBP1Q04837 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SSBP1Q04837 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP1Q04837 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP1Q04837 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SSBP1Q04837 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SSBP1Q04837 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP1Q04837 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.03□□□□□ -0.32
SSBP1Q04837 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSBP1Q04837 KRT8P24-201ENST00000560290 1559 ntBASIC13.03□□□□□ -0.32
SSBP1Q04837 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
SSBP1Q04837 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.02□□□□□ -0.32
SSBP1Q04837 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
SSBP1Q04837 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP1Q04837 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP1Q04837 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP1Q04837 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP1Q04837 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP1Q04837 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.02□□□□□ -0.32
SSBP1Q04837 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.02□□□□□ -0.32
SSBP1Q04837 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SSBP1Q04837 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.02□□□□□ -0.32
SSBP1Q04837 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP1Q04837 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SSBP1Q04837 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.02□□□□□ -0.33
SSBP1Q04837 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 FO393414.2-201ENST00000405153 598 ntBASIC13.02□□□□□ -0.33
SSBP1Q04837 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
SSBP1Q04837 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.02□□□□□ -0.33
SSBP1Q04837 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.02□□□□□ -0.33
SSBP1Q04837 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.02□□□□□ -0.33
SSBP1Q04837 AC015910.1-201ENST00000579400 975 ntBASIC13.02□□□□□ -0.33
SSBP1Q04837 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SSBP1Q04837 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.02□□□□□ -0.33
SSBP1Q04837 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SSBP1Q04837 CICP17-201ENST00000418553 2377 ntBASIC13.02□□□□□ -0.33
SSBP1Q04837 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
SSBP1Q04837 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SSBP1Q04837 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.02□□□□□ -0.33
SSBP1Q04837 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SSBP1Q04837 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP1Q04837 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
SSBP1Q04837 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SSBP1Q04837 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP1Q04837 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP1Q04837 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP1Q04837 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms