Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 CNN2P3-201ENST00000450201 906 ntBASIC16.22■□□□□ 0.19
SKOR1P84550 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.22■□□□□ 0.19
SKOR1P84550 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.22■□□□□ 0.19
SKOR1P84550 AC093214.1-201ENST00000511688 1107 ntBASIC16.22■□□□□ 0.19
SKOR1P84550 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.22■□□□□ 0.19
SKOR1P84550 AC138649.4-201ENST00000612222 287 ntBASIC16.22■□□□□ 0.19
SKOR1P84550 AL136317.3-201ENST00000618497 906 ntBASIC16.22■□□□□ 0.19
SKOR1P84550 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.22■□□□□ 0.19
SKOR1P84550 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.22■□□□□ 0.19
SKOR1P84550 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SKOR1P84550 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.22■□□□□ 0.19
SKOR1P84550 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.22■□□□□ 0.19
SKOR1P84550 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.22■□□□□ 0.19
SKOR1P84550 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.22■□□□□ 0.19
SKOR1P84550 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.22■□□□□ 0.19
SKOR1P84550 REXO1L2P-201ENST00000425429 2069 ntBASIC16.22■□□□□ 0.19
SKOR1P84550 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.22■□□□□ 0.19
SKOR1P84550 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SKOR1P84550 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.21■□□□□ 0.19
SKOR1P84550 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.21■□□□□ 0.19
SKOR1P84550 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SKOR1P84550 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.21■□□□□ 0.19
SKOR1P84550 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.21■□□□□ 0.19
SKOR1P84550 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.21■□□□□ 0.19
SKOR1P84550 KRT8P37-201ENST00000451609 1420 ntBASIC16.21■□□□□ 0.19
SKOR1P84550 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 AC023024.2-201ENST00000623561 1993 ntBASIC16.21■□□□□ 0.19
SKOR1P84550 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SKOR1P84550 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.21■□□□□ 0.19
SKOR1P84550 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.21■□□□□ 0.19
SKOR1P84550 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.21■□□□□ 0.19
SKOR1P84550 SPDYE17-201ENST00000412399 783 ntBASIC16.21■□□□□ 0.19
SKOR1P84550 MTND6P24-201ENST00000440466 518 ntBASIC16.21■□□□□ 0.19
SKOR1P84550 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.21■□□□□ 0.19
SKOR1P84550 INGX-202ENST00000489074 768 ntBASIC16.21■□□□□ 0.19
SKOR1P84550 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.21■□□□□ 0.19
SKOR1P84550 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.21■□□□□ 0.19
SKOR1P84550 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.21■□□□□ 0.19
SKOR1P84550 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.21■□□□□ 0.19
SKOR1P84550 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.21■□□□□ 0.19
SKOR1P84550 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SKOR1P84550 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.21■□□□□ 0.19
SKOR1P84550 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.21■□□□□ 0.19
SKOR1P84550 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.21■□□□□ 0.19
SKOR1P84550 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.21■□□□□ 0.19
SKOR1P84550 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SKOR1P84550 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.18
SKOR1P84550 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SKOR1P84550 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SKOR1P84550 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SKOR1P84550 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SKOR1P84550 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SKOR1P84550 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SKOR1P84550 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SKOR1P84550 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.21■□□□□ 0.18
SKOR1P84550 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.21■□□□□ 0.18
SKOR1P84550 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
SKOR1P84550 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SKOR1P84550 TUBB3P1-201ENST00000405796 1332 ntBASIC16.2■□□□□ 0.18
SKOR1P84550 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SKOR1P84550 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SKOR1P84550 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SKOR1P84550 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SKOR1P84550 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SKOR1P84550 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.2■□□□□ 0.18
SKOR1P84550 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SKOR1P84550 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms