Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLDN2P57739 KRT8P14-201ENST00000414254 1442 ntBASIC15.13■□□□□ 0.01
CLDN2P57739 EIF3FP3-201ENST00000434851 1086 ntBASIC15.13■□□□□ 0.01
CLDN2P57739 GOLGA2P4-201ENST00000441462 777 ntBASIC15.13■□□□□ 0.01
CLDN2P57739 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN2P57739 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN2P57739 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN2P57739 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.13■□□□□ 0.01
CLDN2P57739 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN2P57739 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN2P57739 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN2P57739 RN7SL48P-201ENST00000579283 293 ntBASIC15.13■□□□□ 0.01
CLDN2P57739 AC243960.2-201ENST00000600996 747 ntBASIC15.13■□□□□ 0.01
CLDN2P57739 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN2P57739 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CLDN2P57739 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLDN2P57739 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN2P57739 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN2P57739 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CLDN2P57739 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN2P57739 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN2P57739 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN2P57739 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN2P57739 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN2P57739 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN2P57739 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CLDN2P57739 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 AL645937.2-201ENST00000396808 931 ntBASIC15.12■□□□□ 0.01
CLDN2P57739 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLDN2P57739 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN2P57739 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN2P57739 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN2P57739 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN2P57739 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.12■□□□□ 0.01
CLDN2P57739 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN2P57739 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN2P57739 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN2P57739 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN2P57739 AL118558.3-201ENST00000607414 1079 ntBASIC15.12■□□□□ 0.01
CLDN2P57739 AC244093.1-201ENST00000610837 814 ntBASIC15.12■□□□□ 0.01
CLDN2P57739 ENPP7P14-201ENST00000621765 1040 ntBASIC15.12■□□□□ 0.01
CLDN2P57739 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN2P57739 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN2P57739 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN2P57739 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLDN2P57739 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN2P57739 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN2P57739 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLDN2P57739 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.11■□□□□ 0.01
CLDN2P57739 AC020907.1-201ENST00000616460 1350 ntBASIC15.11■□□□□ 0.01
CLDN2P57739 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN2P57739 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CLDN2P57739 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CLDN2P57739 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
CLDN2P57739 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN2P57739 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN2P57739 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CLDN2P57739 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN2P57739 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms