Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.63□□□□□ -0.07
CLDN8P56748 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CLDN8P56748 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.63□□□□□ -0.07
CLDN8P56748 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CLDN8P56748 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CLDN8P56748 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.63□□□□□ -0.07
CLDN8P56748 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.63□□□□□ -0.07
CLDN8P56748 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.63□□□□□ -0.07
CLDN8P56748 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.63□□□□□ -0.07
CLDN8P56748 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.63□□□□□ -0.07
CLDN8P56748 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.63□□□□□ -0.07
CLDN8P56748 ZNF890P-202ENST00000530367 1156 ntBASIC14.63□□□□□ -0.07
CLDN8P56748 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.63□□□□□ -0.07
CLDN8P56748 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.63□□□□□ -0.07
CLDN8P56748 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.63□□□□□ -0.07
CLDN8P56748 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.63□□□□□ -0.07
CLDN8P56748 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.63□□□□□ -0.07
CLDN8P56748 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
CLDN8P56748 Z92544.3-201ENST00000624747 417 ntBASIC14.63□□□□□ -0.07
CLDN8P56748 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CLDN8P56748 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.63□□□□□ -0.07
CLDN8P56748 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.63□□□□□ -0.07
CLDN8P56748 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.63□□□□□ -0.07
CLDN8P56748 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN8P56748 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CLDN8P56748 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN8P56748 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 LILRP1-201ENST00000444199 1370 ntBASIC14.62□□□□□ -0.07
CLDN8P56748 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN8P56748 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CLDN8P56748 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CLDN8P56748 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 AL139400.1-201ENST00000366220 510 ntBASIC14.62□□□□□ -0.07
CLDN8P56748 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CLDN8P56748 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN8P56748 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CLDN8P56748 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN8P56748 AC004967.1-201ENST00000453589 447 ntBASIC14.62□□□□□ -0.07
CLDN8P56748 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN8P56748 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN8P56748 AC069120.2-201ENST00000524091 540 ntBASIC14.62□□□□□ -0.07
CLDN8P56748 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN8P56748 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CLDN8P56748 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.62□□□□□ -0.07
CLDN8P56748 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CLDN8P56748 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN8P56748 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
CLDN8P56748 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN8P56748 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN8P56748 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN8P56748 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN8P56748 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CLDN8P56748 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CLDN8P56748 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
CLDN8P56748 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN8P56748 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN8P56748 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN8P56748 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CLDN8P56748 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN8P56748 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN8P56748 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN8P56748 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN8P56748 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.61□□□□□ -0.07
CLDN8P56748 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CLDN8P56748 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms