Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2DP55273 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CDKN2DP55273 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CDKN2DP55273 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKN2DP55273 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2DP55273 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDKN2DP55273 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKN2DP55273 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CDKN2DP55273 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2DP55273 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.19■□□□□ 0.02
CDKN2DP55273 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKN2DP55273 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
CDKN2DP55273 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CDKN2DP55273 AL157414.3-201ENST00000624276 1954 ntBASIC15.18■□□□□ 0.02
CDKN2DP55273 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.18■□□□□ 0.02
CDKN2DP55273 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CDKN2DP55273 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.18■□□□□ 0.02
CDKN2DP55273 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CDKN2DP55273 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CDKN2DP55273 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CDKN2DP55273 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.18■□□□□ 0.02
CDKN2DP55273 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.18■□□□□ 0.02
CDKN2DP55273 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKN2DP55273 AL512638.1-201ENST00000457493 794 ntBASIC15.18■□□□□ 0.02
CDKN2DP55273 AC092183.1-201ENST00000469884 875 ntBASIC15.18■□□□□ 0.02
CDKN2DP55273 AC093214.1-201ENST00000511688 1107 ntBASIC15.18■□□□□ 0.02
CDKN2DP55273 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.18■□□□□ 0.02
CDKN2DP55273 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.18■□□□□ 0.02
CDKN2DP55273 RFPL4AP1-201ENST00000530883 850 ntBASIC15.18■□□□□ 0.02
CDKN2DP55273 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKN2DP55273 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.18■□□□□ 0.02
CDKN2DP55273 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CDKN2DP55273 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKN2DP55273 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.18■□□□□ 0.02
CDKN2DP55273 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.18■□□□□ 0.02
CDKN2DP55273 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.18■□□□□ 0.02
CDKN2DP55273 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKN2DP55273 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 AC067930.6-201ENST00000623257 4947 ntBASIC15.18■□□□□ 0.02
CDKN2DP55273 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.18■□□□□ 0.02
CDKN2DP55273 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKN2DP55273 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKN2DP55273 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
CDKN2DP55273 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2DP55273 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKN2DP55273 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.17■□□□□ 0.02
CDKN2DP55273 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKN2DP55273 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
CDKN2DP55273 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDKN2DP55273 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CDKN2DP55273 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 LILRP1-201ENST00000444199 1370 ntBASIC15.17■□□□□ 0.02
CDKN2DP55273 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CDKN2DP55273 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKN2DP55273 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.17■□□□□ 0.02
CDKN2DP55273 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.17■□□□□ 0.02
CDKN2DP55273 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDKN2DP55273 GPALPP1-207ENST00000611650 899 ntBASIC15.17■□□□□ 0.02
CDKN2DP55273 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.17■□□□□ 0.02
CDKN2DP55273 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2DP55273 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CDKN2DP55273 AC018529.2-202ENST00000611482 3087 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms