Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC023024.2-201ENST00000623561 1993 ntBASIC14.69□□□□□ -0.06
NR1H2P55055 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NR1H2P55055 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NR1H2P55055 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.69□□□□□ -0.06
NR1H2P55055 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NR1H2P55055 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NR1H2P55055 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NR1H2P55055 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.69□□□□□ -0.06
NR1H2P55055 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NR1H2P55055 AC107918.2-201ENST00000530817 355 ntBASIC14.69□□□□□ -0.06
NR1H2P55055 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.69□□□□□ -0.06
NR1H2P55055 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.69□□□□□ -0.06
NR1H2P55055 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.69□□□□□ -0.06
NR1H2P55055 AC025678.2-201ENST00000562061 970 ntBASIC14.69□□□□□ -0.06
NR1H2P55055 AC004449.1-201ENST00000564240 433 ntBASIC14.69□□□□□ -0.06
NR1H2P55055 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.69□□□□□ -0.06
NR1H2P55055 AC027612.4-201ENST00000605371 583 ntBASIC14.69□□□□□ -0.06
NR1H2P55055 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.69□□□□□ -0.06
NR1H2P55055 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.69□□□□□ -0.06
NR1H2P55055 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.69□□□□□ -0.06
NR1H2P55055 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.69□□□□□ -0.06
NR1H2P55055 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NR1H2P55055 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
NR1H2P55055 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NR1H2P55055 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.69□□□□□ -0.06
NR1H2P55055 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.68□□□□□ -0.06
NR1H2P55055 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
NR1H2P55055 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NR1H2P55055 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.68□□□□□ -0.06
NR1H2P55055 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
NR1H2P55055 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.68□□□□□ -0.06
NR1H2P55055 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NR1H2P55055 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.68□□□□□ -0.06
NR1H2P55055 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.68□□□□□ -0.06
NR1H2P55055 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 AC004461.1-201ENST00000412461 403 ntBASIC14.68□□□□□ -0.06
NR1H2P55055 AC023141.5-201ENST00000458585 616 ntBASIC14.68□□□□□ -0.06
NR1H2P55055 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.68□□□□□ -0.06
NR1H2P55055 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.68□□□□□ -0.06
NR1H2P55055 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.68□□□□□ -0.06
NR1H2P55055 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.68□□□□□ -0.06
NR1H2P55055 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.68□□□□□ -0.06
NR1H2P55055 MIR3197-201ENST00000582241 73 ntBASIC14.68□□□□□ -0.06
NR1H2P55055 AC022145.2-201ENST00000598203 171 ntBASIC14.68□□□□□ -0.06
NR1H2P55055 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.68□□□□□ -0.06
NR1H2P55055 AL161645.1-201ENST00000622716 1255 ntBASIC14.68□□□□□ -0.06
NR1H2P55055 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.68□□□□□ -0.06
NR1H2P55055 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NR1H2P55055 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.68□□□□□ -0.06
NR1H2P55055 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.68□□□□□ -0.06
NR1H2P55055 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.68□□□□□ -0.06
NR1H2P55055 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NR1H2P55055 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 CR383656.2-201ENST00000548656 2254 ntBASIC14.68□□□□□ -0.06
NR1H2P55055 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms