Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LBX1P52954 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
LBX1P52954 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LBX1P52954 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LBX1P52954 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
LBX1P52954 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
LBX1P52954 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.89■□□□□ 0.29
LBX1P52954 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.89■□□□□ 0.29
LBX1P52954 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.89■□□□□ 0.29
LBX1P52954 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LBX1P52954 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LBX1P52954 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC16.89■□□□□ 0.29
LBX1P52954 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LBX1P52954 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.89■□□□□ 0.29
LBX1P52954 BPIFB5P-201ENST00000457066 1099 ntBASIC16.89■□□□□ 0.29
LBX1P52954 BCRP4-201ENST00000506079 804 ntBASIC16.89■□□□□ 0.29
LBX1P52954 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC16.89■□□□□ 0.29
LBX1P52954 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC16.89■□□□□ 0.29
LBX1P52954 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 APOC1-209ENST00000592885 562 ntTSL 3 BASIC16.89■□□□□ 0.29
LBX1P52954 AL160191.2-201ENST00000603975 601 ntBASIC16.89■□□□□ 0.29
LBX1P52954 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.89■□□□□ 0.29
LBX1P52954 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.89■□□□□ 0.29
LBX1P52954 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.89■□□□□ 0.29
LBX1P52954 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LBX1P52954 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LBX1P52954 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LBX1P52954 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.89■□□□□ 0.29
LBX1P52954 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.89■□□□□ 0.29
LBX1P52954 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LBX1P52954 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LBX1P52954 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
LBX1P52954 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
LBX1P52954 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.88■□□□□ 0.29
LBX1P52954 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.88■□□□□ 0.29
LBX1P52954 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LBX1P52954 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC16.88■□□□□ 0.29
LBX1P52954 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LBX1P52954 GGTLC4P-201ENST00000402176 664 ntBASIC16.88■□□□□ 0.29
LBX1P52954 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.88■□□□□ 0.29
LBX1P52954 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.88■□□□□ 0.29
LBX1P52954 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC16.88■□□□□ 0.29
LBX1P52954 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.88■□□□□ 0.29
LBX1P52954 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC16.88■□□□□ 0.29
LBX1P52954 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.88■□□□□ 0.29
LBX1P52954 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.88■□□□□ 0.29
LBX1P52954 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.88■□□□□ 0.29
LBX1P52954 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LBX1P52954 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LBX1P52954 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.88■□□□□ 0.29
LBX1P52954 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.88■□□□□ 0.29
LBX1P52954 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.87■□□□□ 0.29
LBX1P52954 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LBX1P52954 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LBX1P52954 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.87■□□□□ 0.29
LBX1P52954 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.87■□□□□ 0.29
LBX1P52954 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.87■□□□□ 0.29
LBX1P52954 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.87■□□□□ 0.29
LBX1P52954 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LBX1P52954 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.87■□□□□ 0.29
LBX1P52954 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms