Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.02□□□□□ -0.16
HMGA2P52926 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGA2P52926 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGA2P52926 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.02□□□□□ -0.16
HMGA2P52926 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HMGA2P52926 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGA2P52926 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.02□□□□□ -0.16
HMGA2P52926 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.02□□□□□ -0.16
HMGA2P52926 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HMGA2P52926 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HMGA2P52926 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
HMGA2P52926 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGA2P52926 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HMGA2P52926 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
HMGA2P52926 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 ALG1L5P-201ENST00000482043 771 ntBASIC14.02□□□□□ -0.17
HMGA2P52926 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.02□□□□□ -0.17
HMGA2P52926 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.02□□□□□ -0.17
HMGA2P52926 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 AC005829.1-201ENST00000570002 483 ntBASIC14.02□□□□□ -0.17
HMGA2P52926 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.02□□□□□ -0.17
HMGA2P52926 AL589739.1-201ENST00000607720 493 ntBASIC14.02□□□□□ -0.17
HMGA2P52926 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.02□□□□□ -0.17
HMGA2P52926 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.02□□□□□ -0.17
HMGA2P52926 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.02□□□□□ -0.17
HMGA2P52926 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
HMGA2P52926 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.02□□□□□ -0.17
HMGA2P52926 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.02□□□□□ -0.17
HMGA2P52926 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGA2P52926 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
HMGA2P52926 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HMGA2P52926 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGA2P52926 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HMGA2P52926 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGA2P52926 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGA2P52926 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HMGA2P52926 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGA2P52926 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGA2P52926 CETN4P-206ENST00000642099 2168 ntBASIC14.01□□□□□ -0.17
HMGA2P52926 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGA2P52926 YBX1P5-201ENST00000509441 847 ntBASIC14.01□□□□□ -0.17
HMGA2P52926 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGA2P52926 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.01□□□□□ -0.17
HMGA2P52926 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.01□□□□□ -0.17
HMGA2P52926 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HMGA2P52926 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.01□□□□□ -0.17
HMGA2P52926 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGA2P52926 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGA2P52926 LINC01115-203ENST00000606068 577 ntBASIC14.01□□□□□ -0.17
HMGA2P52926 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGA2P52926 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGA2P52926 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGA2P52926 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.01□□□□□ -0.17
HMGA2P52926 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGA2P52926 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
HMGA2P52926 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HMGA2P52926 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.01□□□□□ -0.17
HMGA2P52926 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGA2P52926 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.01□□□□□ -0.17
HMGA2P52926 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms