Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF140P52738 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ZNF140P52738 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ZNF140P52738 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
ZNF140P52738 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.25■□□□□ 0.03
ZNF140P52738 AL139094.1-201ENST00000405549 1188 ntBASIC15.25■□□□□ 0.03
ZNF140P52738 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.25■□□□□ 0.03
ZNF140P52738 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.25■□□□□ 0.03
ZNF140P52738 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.25■□□□□ 0.03
ZNF140P52738 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
ZNF140P52738 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF140P52738 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.25■□□□□ 0.03
ZNF140P52738 ENPP7P5-201ENST00000541031 1031 ntBASIC15.25■□□□□ 0.03
ZNF140P52738 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF140P52738 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF140P52738 CLUHP6-201ENST00000580789 941 ntBASIC15.25■□□□□ 0.03
ZNF140P52738 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF140P52738 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF140P52738 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.25■□□□□ 0.03
ZNF140P52738 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF140P52738 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF140P52738 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF140P52738 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ZNF140P52738 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF140P52738 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 CICP23-201ENST00000605013 2741 ntBASIC15.24■□□□□ 0.03
ZNF140P52738 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF140P52738 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
ZNF140P52738 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF140P52738 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 AL162726.2-201ENST00000438986 1017 ntBASIC15.24■□□□□ 0.03
ZNF140P52738 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ZNF140P52738 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ZNF140P52738 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
ZNF140P52738 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF140P52738 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF140P52738 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF140P52738 CU634019.7-201ENST00000624153 1185 ntBASIC15.24■□□□□ 0.03
ZNF140P52738 FP236241.2-201ENST00000624906 1185 ntBASIC15.24■□□□□ 0.03
ZNF140P52738 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 KRT8P14-201ENST00000414254 1442 ntBASIC15.24■□□□□ 0.03
ZNF140P52738 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
ZNF140P52738 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ZNF140P52738 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ZNF140P52738 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF140P52738 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF140P52738 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.23■□□□□ 0.03
ZNF140P52738 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF140P52738 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ZNF140P52738 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF140P52738 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
ZNF140P52738 AL137783.1-201ENST00000623494 1896 ntBASIC15.23■□□□□ 0.03
ZNF140P52738 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms