Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GTF2A1P52655 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.15■□□□□ 0.02
GTF2A1P52655 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC15.15■□□□□ 0.02
GTF2A1P52655 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 AL358933.1-201ENST00000565046 2830 ntBASIC15.15■□□□□ 0.02
GTF2A1P52655 USP47-202ENST00000339865 7775 ntTSL 2 BASIC15.15■□□□□ 0.02
GTF2A1P52655 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 HBZP1-201ENST00000354915 429 ntBASIC15.15■□□□□ 0.02
GTF2A1P52655 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC15.15■□□□□ 0.02
GTF2A1P52655 LIN28AP1-201ENST00000429574 405 ntBASIC15.15■□□□□ 0.02
GTF2A1P52655 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.15■□□□□ 0.02
GTF2A1P52655 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.15■□□□□ 0.02
GTF2A1P52655 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.15■□□□□ 0.02
GTF2A1P52655 VENTXP5-201ENST00000523979 775 ntBASIC15.15■□□□□ 0.02
GTF2A1P52655 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.15■□□□□ 0.02
GTF2A1P52655 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.15■□□□□ 0.02
GTF2A1P52655 STK25P1-201ENST00000585406 838 ntBASIC15.15■□□□□ 0.02
GTF2A1P52655 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.15■□□□□ 0.02
GTF2A1P52655 AC145285.6-201ENST00000604632 637 ntBASIC15.15■□□□□ 0.02
GTF2A1P52655 AC139887.4-201ENST00000607877 719 ntBASIC15.15■□□□□ 0.02
GTF2A1P52655 PGM5P2-202ENST00000637225 1043 ntBASIC15.15■□□□□ 0.02
GTF2A1P52655 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.15■□□□□ 0.02
GTF2A1P52655 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC15.15■□□□□ 0.02
GTF2A1P52655 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
GTF2A1P52655 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
GTF2A1P52655 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC15.15■□□□□ 0.02
GTF2A1P52655 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
GTF2A1P52655 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GTF2A1P52655 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GTF2A1P52655 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.15■□□□□ 0.02
GTF2A1P52655 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC15.15■□□□□ 0.02
GTF2A1P52655 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC15.14■□□□□ 0.01
GTF2A1P52655 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 AC026992.2-203ENST00000563004 2419 ntBASIC15.14■□□□□ 0.01
GTF2A1P52655 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.14■□□□□ 0.01
GTF2A1P52655 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
GTF2A1P52655 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.14■□□□□ 0.01
GTF2A1P52655 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.14■□□□□ 0.01
GTF2A1P52655 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.14■□□□□ 0.01
GTF2A1P52655 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 ATP5G1P1-201ENST00000448724 379 ntBASIC15.14■□□□□ 0.01
GTF2A1P52655 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
GTF2A1P52655 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.14■□□□□ 0.01
GTF2A1P52655 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 AC112176.1-201ENST00000565428 3024 ntBASIC15.14■□□□□ 0.01
GTF2A1P52655 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 AC125634.1-201ENST00000438758 1403 ntBASIC15.14■□□□□ 0.01
GTF2A1P52655 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC15.14■□□□□ 0.01
GTF2A1P52655 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.14■□□□□ 0.01
GTF2A1P52655 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.14■□□□□ 0.01
GTF2A1P52655 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.14■□□□□ 0.01
GTF2A1P52655 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GTF2A1P52655 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.14■□□□□ 0.01
GTF2A1P52655 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.13■□□□□ 0.01
GTF2A1P52655 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.13■□□□□ 0.01
GTF2A1P52655 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC15.13■□□□□ 0.01
GTF2A1P52655 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GTF2A1P52655 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.13■□□□□ 0.01
GTF2A1P52655 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
GTF2A1P52655 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC15.13■□□□□ 0.01
GTF2A1P52655 AC023024.2-201ENST00000623561 1993 ntBASIC15.13■□□□□ 0.01
GTF2A1P52655 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC15.13■□□□□ 0.01
GTF2A1P52655 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms