Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCN1P35523 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CLCN1P35523 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CLCN1P35523 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLCN1P35523 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCN1P35523 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.57■□□□□ 0.4
CLCN1P35523 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.57■□□□□ 0.4
CLCN1P35523 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
CLCN1P35523 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC17.57■□□□□ 0.4
CLCN1P35523 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCN1P35523 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCN1P35523 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCN1P35523 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCN1P35523 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCN1P35523 AC068137.2-201ENST00000605408 478 ntBASIC17.57■□□□□ 0.4
CLCN1P35523 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCN1P35523 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC17.57■□□□□ 0.4
CLCN1P35523 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCN1P35523 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCN1P35523 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCN1P35523 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLCN1P35523 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLCN1P35523 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCN1P35523 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCN1P35523 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLCN1P35523 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLCN1P35523 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CLCN1P35523 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CLCN1P35523 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLCN1P35523 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLCN1P35523 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN1P35523 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN1P35523 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN1P35523 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN1P35523 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CLCN1P35523 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN1P35523 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN1P35523 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 HAUS4P1-201ENST00000406739 1145 ntBASIC17.56■□□□□ 0.4
CLCN1P35523 AC093724.1-201ENST00000448659 1027 ntBASIC17.56■□□□□ 0.4
CLCN1P35523 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.56■□□□□ 0.4
CLCN1P35523 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.56■□□□□ 0.4
CLCN1P35523 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.56■□□□□ 0.4
CLCN1P35523 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.56■□□□□ 0.4
CLCN1P35523 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLCN1P35523 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN1P35523 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLCN1P35523 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLCN1P35523 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN1P35523 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN1P35523 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN1P35523 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCN1P35523 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN1P35523 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN1P35523 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.55■□□□□ 0.4
CLCN1P35523 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCN1P35523 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN1P35523 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN1P35523 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLCN1P35523 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLCN1P35523 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCN1P35523 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms