Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
MMP11P24347 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.62□□□□□ -0.07
MMP11P24347 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MMP11P24347 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.62□□□□□ -0.07
MMP11P24347 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP11P24347 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.62□□□□□ -0.07
MMP11P24347 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MMP11P24347 AC091951.1-201ENST00000512854 2465 ntBASIC14.62□□□□□ -0.07
MMP11P24347 PTP4A1P2-201ENST00000546033 454 ntBASIC14.62□□□□□ -0.07
MMP11P24347 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.62□□□□□ -0.07
MMP11P24347 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.62□□□□□ -0.07
MMP11P24347 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MMP11P24347 AP005482.1-201ENST00000563722 1273 ntBASIC14.62□□□□□ -0.07
MMP11P24347 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
MMP11P24347 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.62□□□□□ -0.07
MMP11P24347 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.62□□□□□ -0.07
MMP11P24347 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.62□□□□□ -0.07
MMP11P24347 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.62□□□□□ -0.07
MMP11P24347 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.62□□□□□ -0.07
MMP11P24347 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.62□□□□□ -0.07
MMP11P24347 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP11P24347 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
MMP11P24347 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
MMP11P24347 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.62□□□□□ -0.07
MMP11P24347 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.62□□□□□ -0.07
MMP11P24347 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP11P24347 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP11P24347 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP11P24347 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP11P24347 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
MMP11P24347 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.61□□□□□ -0.07
MMP11P24347 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP11P24347 AC018665.1-201ENST00000622927 1362 ntBASIC14.61□□□□□ -0.07
MMP11P24347 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
MMP11P24347 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.61□□□□□ -0.07
MMP11P24347 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP11P24347 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
MMP11P24347 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.61□□□□□ -0.07
MMP11P24347 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.61□□□□□ -0.07
MMP11P24347 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
MMP11P24347 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.61□□□□□ -0.07
MMP11P24347 AC009486.1-201ENST00000569860 813 ntBASIC14.61□□□□□ -0.07
MMP11P24347 MIR4313-201ENST00000580760 101 ntBASIC14.61□□□□□ -0.07
MMP11P24347 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP11P24347 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.61□□□□□ -0.07
MMP11P24347 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP11P24347 AL022328.1-201ENST00000610050 478 ntBASIC14.61□□□□□ -0.07
MMP11P24347 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
MMP11P24347 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.61□□□□□ -0.07
MMP11P24347 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
MMP11P24347 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP11P24347 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP11P24347 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
MMP11P24347 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
MMP11P24347 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP11P24347 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP11P24347 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
MMP11P24347 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
MMP11P24347 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP11P24347 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MMP11P24347 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.6□□□□□ -0.07
MMP11P24347 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
MMP11P24347 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
MMP11P24347 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
MMP11P24347 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MMP11P24347 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MMP11P24347 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
MMP11P24347 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MMP11P24347 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP11P24347 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
MMP11P24347 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP11P24347 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
MMP11P24347 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP11P24347 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP11P24347 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP11P24347 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MMP11P24347 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.6□□□□□ -0.07
MMP11P24347 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MMP11P24347 RPS2P32-201ENST00000439199 892 ntBASIC14.6□□□□□ -0.07
MMP11P24347 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
MMP11P24347 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms