Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CCL3L1P16619 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL3L1P16619 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.7□□□□□ -0.38
CCL3L1P16619 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.7□□□□□ -0.38
CCL3L1P16619 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.7□□□□□ -0.38
CCL3L1P16619 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
CCL3L1P16619 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.7□□□□□ -0.38
CCL3L1P16619 GAPDHP40-201ENST00000505218 1006 ntBASIC12.7□□□□□ -0.38
CCL3L1P16619 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.7□□□□□ -0.38
CCL3L1P16619 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL3L1P16619 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.7□□□□□ -0.38
CCL3L1P16619 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CCL3L1P16619 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CCL3L1P16619 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CCL3L1P16619 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL3L1P16619 MYO15B-237ENST00000642007 4893 ntBASIC12.7□□□□□ -0.38
CCL3L1P16619 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL3L1P16619 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
CCL3L1P16619 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL3L1P16619 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL3L1P16619 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL3L1P16619 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CCL3L1P16619 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL3L1P16619 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL3L1P16619 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL3L1P16619 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL3L1P16619 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 AC124283.3-201ENST00000570869 594 ntBASIC12.69□□□□□ -0.38
CCL3L1P16619 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL3L1P16619 AC133539.2-201ENST00000604757 467 ntBASIC12.69□□□□□ -0.38
CCL3L1P16619 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 AC025048.6-201ENST00000634326 1161 ntBASIC12.69□□□□□ -0.38
CCL3L1P16619 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL3L1P16619 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CCL3L1P16619 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL3L1P16619 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL3L1P16619 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL3L1P16619 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
CCL3L1P16619 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL3L1P16619 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL3L1P16619 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL3L1P16619 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CCL3L1P16619 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CCL3L1P16619 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL3L1P16619 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CCL3L1P16619 AL138799.1-201ENST00000448213 1675 ntBASIC12.68□□□□□ -0.38
CCL3L1P16619 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL3L1P16619 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCL3L1P16619 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CCL3L1P16619 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms