Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.28■□□□□ 0.04
TIMP2P16035 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.28■□□□□ 0.04
TIMP2P16035 BNIP3P29-201ENST00000598302 571 ntBASIC15.28■□□□□ 0.04
TIMP2P16035 AC011447.5-201ENST00000616168 564 ntBASIC15.28■□□□□ 0.04
TIMP2P16035 RHOXF1P1-202ENST00000635473 501 ntBASIC15.28■□□□□ 0.04
TIMP2P16035 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TIMP2P16035 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP2P16035 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP2P16035 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP2P16035 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.28■□□□□ 0.04
TIMP2P16035 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP2P16035 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP2P16035 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.28■□□□□ 0.04
TIMP2P16035 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP2P16035 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP2P16035 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP2P16035 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMP2P16035 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMP2P16035 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP2P16035 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP2P16035 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP2P16035 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP2P16035 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMP2P16035 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP2P16035 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP2P16035 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP2P16035 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMP2P16035 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMP2P16035 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP2P16035 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP2P16035 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP2P16035 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP2P16035 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP2P16035 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP2P16035 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TIMP2P16035 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP2P16035 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.27■□□□□ 0.04
TIMP2P16035 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TIMP2P16035 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP2P16035 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.27■□□□□ 0.04
TIMP2P16035 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
TIMP2P16035 HLA-V-201ENST00000429037 534 ntBASIC15.27■□□□□ 0.04
TIMP2P16035 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TIMP2P16035 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.27■□□□□ 0.04
TIMP2P16035 AC007274.1-201ENST00000439805 662 ntBASIC15.27■□□□□ 0.04
TIMP2P16035 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMP2P16035 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.27■□□□□ 0.04
TIMP2P16035 FO681548.1-201ENST00000455617 1132 ntBASIC15.27■□□□□ 0.04
TIMP2P16035 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TIMP2P16035 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMP2P16035 RNA5SP486-201ENST00000515961 83 ntBASIC15.27■□□□□ 0.04
TIMP2P16035 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.27■□□□□ 0.04
TIMP2P16035 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMP2P16035 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TIMP2P16035 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.27■□□□□ 0.04
TIMP2P16035 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.27■□□□□ 0.04
TIMP2P16035 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
TIMP2P16035 DUX4L47-201ENST00000566374 394 ntBASIC15.27■□□□□ 0.04
TIMP2P16035 AC132872.1-201ENST00000566986 1195 ntBASIC15.27■□□□□ 0.04
TIMP2P16035 RN7SL48P-201ENST00000579283 293 ntBASIC15.27■□□□□ 0.04
TIMP2P16035 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.27■□□□□ 0.04
TIMP2P16035 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
TIMP2P16035 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP2P16035 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.27■□□□□ 0.03
TIMP2P16035 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP2P16035 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP2P16035 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.27■□□□□ 0.03
TIMP2P16035 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TIMP2P16035 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP2P16035 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP2P16035 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP2P16035 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP2P16035 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP2P16035 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP2P16035 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.27■□□□□ 0.03
TIMP2P16035 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP2P16035 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP2P16035 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TIMP2P16035 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP2P16035 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP2P16035 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP2P16035 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.26■□□□□ 0.03
TIMP2P16035 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TIMP2P16035 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.26■□□□□ 0.03
TIMP2P16035 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.26■□□□□ 0.03
TIMP2P16035 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.26■□□□□ 0.03
TIMP2P16035 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP2P16035 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP2P16035 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.26■□□□□ 0.03
TIMP2P16035 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TIMP2P16035 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.26■□□□□ 0.03
TIMP2P16035 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP2P16035 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP2P16035 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.26■□□□□ 0.03
TIMP2P16035 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.26■□□□□ 0.03
TIMP2P16035 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.26■□□□□ 0.03
TIMP2P16035 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP2P16035 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.26■□□□□ 0.03
TIMP2P16035 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP2P16035 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms