Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.07■□□□□ 0.32
COL11A1P12107 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.07■□□□□ 0.32
COL11A1P12107 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
COL11A1P12107 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
COL11A1P12107 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.07■□□□□ 0.32
COL11A1P12107 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
COL11A1P12107 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.07■□□□□ 0.32
COL11A1P12107 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.07■□□□□ 0.32
COL11A1P12107 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.07■□□□□ 0.32
COL11A1P12107 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
COL11A1P12107 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COL11A1P12107 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.07■□□□□ 0.32
COL11A1P12107 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
COL11A1P12107 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.06■□□□□ 0.32
COL11A1P12107 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COL11A1P12107 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.06■□□□□ 0.32
COL11A1P12107 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 SALL4P5-201ENST00000419001 1760 ntBASIC17.06■□□□□ 0.32
COL11A1P12107 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
COL11A1P12107 AL008707.1-201ENST00000422498 534 ntBASIC17.06■□□□□ 0.32
COL11A1P12107 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.06■□□□□ 0.32
COL11A1P12107 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.06■□□□□ 0.32
COL11A1P12107 RPL18P13-201ENST00000478088 569 ntBASIC17.06■□□□□ 0.32
COL11A1P12107 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.06■□□□□ 0.32
COL11A1P12107 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
COL11A1P12107 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
COL11A1P12107 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.06■□□□□ 0.32
COL11A1P12107 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.06■□□□□ 0.32
COL11A1P12107 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.06■□□□□ 0.32
COL11A1P12107 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
COL11A1P12107 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.06■□□□□ 0.32
COL11A1P12107 ZBED1P1-201ENST00000502364 1930 ntBASIC17.06■□□□□ 0.32
COL11A1P12107 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL11A1P12107 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
COL11A1P12107 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
COL11A1P12107 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
COL11A1P12107 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.05■□□□□ 0.32
COL11A1P12107 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.05■□□□□ 0.32
COL11A1P12107 RN7SL181P-201ENST00000462921 277 ntBASIC17.05■□□□□ 0.32
COL11A1P12107 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.05■□□□□ 0.32
COL11A1P12107 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.05■□□□□ 0.32
COL11A1P12107 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
COL11A1P12107 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.05■□□□□ 0.32
COL11A1P12107 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.05■□□□□ 0.32
COL11A1P12107 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.05■□□□□ 0.32
COL11A1P12107 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.05■□□□□ 0.32
COL11A1P12107 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
COL11A1P12107 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.05■□□□□ 0.32
COL11A1P12107 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 AL157791.1-201ENST00000553667 1699 ntBASIC17.05■□□□□ 0.32
COL11A1P12107 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.05■□□□□ 0.32
COL11A1P12107 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.05■□□□□ 0.32
COL11A1P12107 AC008894.3-201ENST00000624324 3103 ntBASIC17.05■□□□□ 0.32
COL11A1P12107 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.05■□□□□ 0.32
COL11A1P12107 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 FAM58BP-201ENST00000439056 645 ntBASIC17.05■□□□□ 0.32
COL11A1P12107 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.05■□□□□ 0.32
COL11A1P12107 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.05■□□□□ 0.32
COL11A1P12107 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms