Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
UBCP0CG48 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.56□□□□□ -0.24
UBCP0CG48 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.56□□□□□ -0.24
UBCP0CG48 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.56□□□□□ -0.24
UBCP0CG48 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.56□□□□□ -0.24
UBCP0CG48 DNAJB3-201ENST00000446806 729 ntBASIC13.56□□□□□ -0.24
UBCP0CG48 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.56□□□□□ -0.24
UBCP0CG48 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.56□□□□□ -0.24
UBCP0CG48 AC005829.1-201ENST00000570002 483 ntBASIC13.56□□□□□ -0.24
UBCP0CG48 AC015910.1-201ENST00000579400 975 ntBASIC13.56□□□□□ -0.24
UBCP0CG48 RN7SL828P-201ENST00000607615 303 ntBASIC13.56□□□□□ -0.24
UBCP0CG48 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.56□□□□□ -0.24
UBCP0CG48 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.56□□□□□ -0.24
UBCP0CG48 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.56□□□□□ -0.24
UBCP0CG48 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.56□□□□□ -0.24
UBCP0CG48 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.56□□□□□ -0.24
UBCP0CG48 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.56□□□□□ -0.24
UBCP0CG48 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.56□□□□□ -0.24
UBCP0CG48 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.56□□□□□ -0.24
UBCP0CG48 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
UBCP0CG48 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
UBCP0CG48 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.56□□□□□ -0.24
UBCP0CG48 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.56□□□□□ -0.24
UBCP0CG48 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.56□□□□□ -0.24
UBCP0CG48 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
UBCP0CG48 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
UBCP0CG48 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.56□□□□□ -0.24
UBCP0CG48 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
UBCP0CG48 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.55□□□□□ -0.24
UBCP0CG48 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.55□□□□□ -0.24
UBCP0CG48 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.55□□□□□ -0.24
UBCP0CG48 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.55□□□□□ -0.24
UBCP0CG48 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
UBCP0CG48 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.55□□□□□ -0.24
UBCP0CG48 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
UBCP0CG48 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
UBCP0CG48 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 ACE3P-201ENST00000423435 1973 ntBASIC13.55□□□□□ -0.24
UBCP0CG48 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.55□□□□□ -0.24
UBCP0CG48 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.55□□□□□ -0.24
UBCP0CG48 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.55□□□□□ -0.24
UBCP0CG48 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.55□□□□□ -0.24
UBCP0CG48 MTND6P24-201ENST00000440466 518 ntBASIC13.55□□□□□ -0.24
UBCP0CG48 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.55□□□□□ -0.24
UBCP0CG48 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.55□□□□□ -0.24
UBCP0CG48 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.55□□□□□ -0.24
UBCP0CG48 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.55□□□□□ -0.24
UBCP0CG48 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.55□□□□□ -0.24
UBCP0CG48 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.55□□□□□ -0.24
UBCP0CG48 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.55□□□□□ -0.24
UBCP0CG48 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.55□□□□□ -0.24
UBCP0CG48 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.55□□□□□ -0.24
UBCP0CG48 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.55□□□□□ -0.24
UBCP0CG48 AL121894.2-201ENST00000602977 491 ntBASIC13.55□□□□□ -0.24
UBCP0CG48 AL133215.2-201ENST00000609242 977 ntBASIC13.55□□□□□ -0.24
UBCP0CG48 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
UBCP0CG48 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.55□□□□□ -0.24
UBCP0CG48 AC015656.1-201ENST00000624209 3578 ntBASIC13.55□□□□□ -0.24
UBCP0CG48 REXO1L2P-201ENST00000425429 2069 ntBASIC13.55□□□□□ -0.24
UBCP0CG48 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
UBCP0CG48 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
UBCP0CG48 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBCP0CG48 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms