Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
THBS1P07996 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.19□□□□□ -0.14
THBS1P07996 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
THBS1P07996 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.19□□□□□ -0.14
THBS1P07996 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 IGHV3-42-201ENST00000520410 361 ntBASIC14.19□□□□□ -0.14
THBS1P07996 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
THBS1P07996 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.19□□□□□ -0.14
THBS1P07996 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 SAMD11P1-201ENST00000571429 661 ntBASIC14.19□□□□□ -0.14
THBS1P07996 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.19□□□□□ -0.14
THBS1P07996 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 AL391069.4-201ENST00000609583 481 ntBASIC14.19□□□□□ -0.14
THBS1P07996 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.19□□□□□ -0.14
THBS1P07996 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
THBS1P07996 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.19□□□□□ -0.14
THBS1P07996 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
THBS1P07996 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.18□□□□□ -0.14
THBS1P07996 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
THBS1P07996 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.18□□□□□ -0.14
THBS1P07996 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
THBS1P07996 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
THBS1P07996 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.18□□□□□ -0.14
THBS1P07996 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.18□□□□□ -0.14
THBS1P07996 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 INGX-202ENST00000489074 768 ntBASIC14.18□□□□□ -0.14
THBS1P07996 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
THBS1P07996 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.18□□□□□ -0.14
THBS1P07996 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 AC190387.1-201ENST00000551683 408 ntBASIC14.18□□□□□ -0.14
THBS1P07996 AC009407.1-201ENST00000568958 598 ntBASIC14.18□□□□□ -0.14
THBS1P07996 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.18□□□□□ -0.14
THBS1P07996 RN7SL204P-201ENST00000582831 262 ntBASIC14.18□□□□□ -0.14
THBS1P07996 AC239800.4-201ENST00000603712 296 ntBASIC14.18□□□□□ -0.14
THBS1P07996 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
THBS1P07996 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
THBS1P07996 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
THBS1P07996 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.18□□□□□ -0.14
THBS1P07996 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
THBS1P07996 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms