Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGCRP04035 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCRP04035 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCRP04035 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
HMGCRP04035 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
HMGCRP04035 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCRP04035 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCRP04035 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HMGCRP04035 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCRP04035 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCRP04035 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCRP04035 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGCRP04035 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCRP04035 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
HMGCRP04035 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCRP04035 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCRP04035 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGCRP04035 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
HMGCRP04035 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
HMGCRP04035 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGCRP04035 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCRP04035 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.19■□□□□ 0.34
HMGCRP04035 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 AC019193.1-201ENST00000506678 823 ntBASIC17.19■□□□□ 0.34
HMGCRP04035 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGCRP04035 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGCRP04035 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.19■□□□□ 0.34
HMGCRP04035 AC073352.2-201ENST00000609385 439 ntBASIC17.19■□□□□ 0.34
HMGCRP04035 AL136295.7-201ENST00000619226 1200 ntBASIC17.19■□□□□ 0.34
HMGCRP04035 AC011491.1-203ENST00000637688 543 ntBASIC17.19■□□□□ 0.34
HMGCRP04035 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
HMGCRP04035 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGCRP04035 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGCRP04035 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCRP04035 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCRP04035 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
HMGCRP04035 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HMGCRP04035 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HMGCRP04035 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGCRP04035 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.18■□□□□ 0.34
HMGCRP04035 AC114501.1-201ENST00000445949 172 ntBASIC17.18■□□□□ 0.34
HMGCRP04035 AC098935.1-201ENST00000446057 611 ntBASIC17.18■□□□□ 0.34
HMGCRP04035 NOC2LP1-201ENST00000450578 752 ntBASIC17.18■□□□□ 0.34
HMGCRP04035 CEP164P1-201ENST00000455142 418 ntBASIC17.18■□□□□ 0.34
HMGCRP04035 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
HMGCRP04035 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGCRP04035 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGCRP04035 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HMGCRP04035 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.18■□□□□ 0.34
HMGCRP04035 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGCRP04035 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HMGCRP04035 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HMGCRP04035 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGCRP04035 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HMGCRP04035 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
HMGCRP04035 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGCRP04035 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGCRP04035 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCRP04035 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCRP04035 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.17■□□□□ 0.34
HMGCRP04035 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMGCRP04035 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCRP04035 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMGCRP04035 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HMGCRP04035 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCRP04035 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms