Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC6.66□□□□□ -1.34
USH2AO75445 RN7SKP230-201ENST00000365642 335 ntBASIC6.66□□□□□ -1.34
USH2AO75445 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC6.66□□□□□ -1.34
USH2AO75445 AC114947.1-202ENST00000514136 344 ntBASIC6.66□□□□□ -1.34
USH2AO75445 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC6.66□□□□□ -1.34
USH2AO75445 KRT18P37-201ENST00000520711 1282 ntBASIC6.66□□□□□ -1.34
USH2AO75445 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC6.66□□□□□ -1.34
USH2AO75445 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC6.66□□□□□ -1.34
USH2AO75445 FBXO36P1-201ENST00000579006 471 ntBASIC6.66□□□□□ -1.34
USH2AO75445 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC6.66□□□□□ -1.34
USH2AO75445 AC009884.2-201ENST00000603110 324 ntBASIC6.66□□□□□ -1.34
USH2AO75445 AL136295.7-201ENST00000619226 1200 ntBASIC6.66□□□□□ -1.34
USH2AO75445 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC6.66□□□□□ -1.34
USH2AO75445 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 KRT18P9-201ENST00000604826 1300 ntBASIC6.66□□□□□ -1.34
USH2AO75445 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC6.66□□□□□ -1.34
USH2AO75445 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
USH2AO75445 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC6.66□□□□□ -1.34
USH2AO75445 GEMIN8P4-201ENST00000380526 729 ntBASIC6.66□□□□□ -1.34
USH2AO75445 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
USH2AO75445 RPL35P9-201ENST00000446059 350 ntBASIC6.66□□□□□ -1.34
USH2AO75445 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 RNA5SP417-201ENST00000516459 108 ntBASIC6.66□□□□□ -1.34
USH2AO75445 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC6.66□□□□□ -1.34
USH2AO75445 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC6.66□□□□□ -1.34
USH2AO75445 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC6.66□□□□□ -1.34
USH2AO75445 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 AC009145.4-201ENST00000625119 1294 ntBASIC6.66□□□□□ -1.34
USH2AO75445 FRMPD2B-201ENST00000431305 1347 ntBASIC6.66□□□□□ -1.34
USH2AO75445 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 CYP4F23P-201ENST00000593402 1579 ntBASIC6.66□□□□□ -1.34
USH2AO75445 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC6.66□□□□□ -1.34
USH2AO75445 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
USH2AO75445 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC6.66□□□□□ -1.34
USH2AO75445 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
USH2AO75445 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
USH2AO75445 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC6.66□□□□□ -1.34
USH2AO75445 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC6.66□□□□□ -1.34
USH2AO75445 AL356000.1-201ENST00000441073 1238 ntBASIC6.66□□□□□ -1.34
USH2AO75445 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC6.66□□□□□ -1.34
USH2AO75445 FAM86B3P-203ENST00000523992 854 ntBASIC6.66□□□□□ -1.34
USH2AO75445 FOXN3-AS2-201ENST00000554071 1262 ntBASIC6.66□□□□□ -1.34
USH2AO75445 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC6.66□□□□□ -1.34
USH2AO75445 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC6.66□□□□□ -1.34
USH2AO75445 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
USH2AO75445 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
USH2AO75445 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
USH2AO75445 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
USH2AO75445 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
USH2AO75445 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC6.65□□□□□ -1.34
USH2AO75445 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 FKBP4P6-201ENST00000457486 1332 ntBASIC6.65□□□□□ -1.34
USH2AO75445 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
USH2AO75445 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC6.65□□□□□ -1.34
USH2AO75445 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC6.65□□□□□ -1.34
USH2AO75445 VENTXP4-201ENST00000449029 958 ntBASIC6.65□□□□□ -1.34
USH2AO75445 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC6.65□□□□□ -1.34
USH2AO75445 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
USH2AO75445 AC010632.2-201ENST00000588369 1224 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms