Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 AC134407.2-201ENST00000625089 1978 ntBASIC15.28■□□□□ 0.04
PCDHGA12O60330 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 C2orf69P2-201ENST00000562032 1123 ntBASIC15.28■□□□□ 0.04
PCDHGA12O60330 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA12O60330 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA12O60330 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGA12O60330 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGA12O60330 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGA12O60330 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGA12O60330 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGA12O60330 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 AC006001.1-201ENST00000325130 474 ntBASIC15.27■□□□□ 0.04
PCDHGA12O60330 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PCDHGA12O60330 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.27■□□□□ 0.04
PCDHGA12O60330 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA12O60330 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGA12O60330 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHGA12O60330 ZNF767P-206ENST00000513792 565 ntBASIC15.27■□□□□ 0.04
PCDHGA12O60330 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGA12O60330 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHGA12O60330 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGA12O60330 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGA12O60330 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGA12O60330 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA12O60330 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDHGA12O60330 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDHGA12O60330 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA12O60330 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHGA12O60330 AL607033.1-201ENST00000623900 1599 ntBASIC15.27■□□□□ 0.03
PCDHGA12O60330 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA12O60330 TNRC18P2-201ENST00000417666 2714 ntBASIC15.27■□□□□ 0.03
PCDHGA12O60330 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA12O60330 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHGA12O60330 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDHGA12O60330 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA12O60330 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA12O60330 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms