Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ITM2AO43736 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
ITM2AO43736 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ITM2AO43736 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ITM2AO43736 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ITM2AO43736 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
ITM2AO43736 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.11■□□□□ 0.01
ITM2AO43736 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.11■□□□□ 0.01
ITM2AO43736 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.11■□□□□ 0.01
ITM2AO43736 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.11■□□□□ 0.01
ITM2AO43736 ALG1L8P-201ENST00000533887 760 ntBASIC15.11■□□□□ 0.01
ITM2AO43736 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.11■□□□□ 0.01
ITM2AO43736 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.11■□□□□ 0.01
ITM2AO43736 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.11■□□□□ 0.01
ITM2AO43736 AC018529.1-201ENST00000613063 361 ntBASIC15.11■□□□□ 0.01
ITM2AO43736 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ITM2AO43736 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ITM2AO43736 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.11■□□□□ 0.01
ITM2AO43736 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ITM2AO43736 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ITM2AO43736 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.11■□□□□ 0.01
ITM2AO43736 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.11■□□□□ 0.01
ITM2AO43736 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ITM2AO43736 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ITM2AO43736 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.11■□□□□ 0.01
ITM2AO43736 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ITM2AO43736 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ITM2AO43736 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.11■□□□□ 0.01
ITM2AO43736 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ITM2AO43736 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.11■□□□□ 0.01
ITM2AO43736 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.11■□□□□ 0.01
ITM2AO43736 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.1■□□□□ 0.01
ITM2AO43736 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.1■□□□□ 0.01
ITM2AO43736 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ITM2AO43736 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.1■□□□□ 0.01
ITM2AO43736 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.1■□□□□ 0.01
ITM2AO43736 AC138969.3-201ENST00000546612 1459 ntBASIC15.1■□□□□ 0.01
ITM2AO43736 AC138932.2-201ENST00000548268 1459 ntBASIC15.1■□□□□ 0.01
ITM2AO43736 AC126755.4-201ENST00000549796 1459 ntBASIC15.1■□□□□ 0.01
ITM2AO43736 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.1■□□□□ 0.01
ITM2AO43736 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.1■□□□□ 0.01
ITM2AO43736 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ITM2AO43736 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.1■□□□□ 0.01
ITM2AO43736 FAM58DP-201ENST00000428076 619 ntBASIC15.1■□□□□ 0.01
ITM2AO43736 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.1■□□□□ 0.01
ITM2AO43736 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ITM2AO43736 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.1■□□□□ 0.01
ITM2AO43736 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
ITM2AO43736 AC025181.2-201ENST00000606994 802 ntBASIC15.1■□□□□ 0.01
ITM2AO43736 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
ITM2AO43736 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.1■□□□□ 0.01
ITM2AO43736 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
ITM2AO43736 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.1■□□□□ 0.01
ITM2AO43736 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
ITM2AO43736 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.1■□□□□ 0.01
ITM2AO43736 AC152010.1-201ENST00000415779 2006 ntBASIC15.1■□□□□ 0.01
ITM2AO43736 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.1■□□□□ 0.01
ITM2AO43736 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ITM2AO43736 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms