Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.65■□□□□ 0.1
RIPK2O43353 AC105021.1-202ENST00000570572 669 ntBASIC15.65■□□□□ 0.1
RIPK2O43353 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.65■□□□□ 0.1
RIPK2O43353 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.65■□□□□ 0.1
RIPK2O43353 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.65■□□□□ 0.1
RIPK2O43353 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RIPK2O43353 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.65■□□□□ 0.1
RIPK2O43353 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.65■□□□□ 0.1
RIPK2O43353 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 AL137784.3-201ENST00000623858 2288 ntBASIC15.65■□□□□ 0.1
RIPK2O43353 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.65■□□□□ 0.1
RIPK2O43353 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.65■□□□□ 0.1
RIPK2O43353 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RIPK2O43353 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.65■□□□□ 0.1
RIPK2O43353 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPK2O43353 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPK2O43353 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPK2O43353 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.64■□□□□ 0.09
RIPK2O43353 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RIPK2O43353 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPK2O43353 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPK2O43353 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPK2O43353 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPK2O43353 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RIPK2O43353 AC074338.1-201ENST00000416825 156 ntBASIC15.64■□□□□ 0.09
RIPK2O43353 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPK2O43353 FAM58CP-201ENST00000435741 640 ntBASIC15.64■□□□□ 0.09
RIPK2O43353 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.64■□□□□ 0.09
RIPK2O43353 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.64■□□□□ 0.09
RIPK2O43353 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RIPK2O43353 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.64■□□□□ 0.09
RIPK2O43353 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.64■□□□□ 0.09
RIPK2O43353 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.64■□□□□ 0.09
RIPK2O43353 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.64■□□□□ 0.09
RIPK2O43353 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.64■□□□□ 0.09
RIPK2O43353 AC106730.1-201ENST00000566722 1090 ntBASIC15.64■□□□□ 0.09
RIPK2O43353 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.64■□□□□ 0.09
RIPK2O43353 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.64■□□□□ 0.09
RIPK2O43353 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.64■□□□□ 0.09
RIPK2O43353 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.64■□□□□ 0.09
RIPK2O43353 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPK2O43353 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPK2O43353 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.64■□□□□ 0.09
RIPK2O43353 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.64■□□□□ 0.09
RIPK2O43353 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RIPK2O43353 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
RIPK2O43353 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPK2O43353 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPK2O43353 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RIPK2O43353 UXT-AS1-201ENST00000590504 1525 ntBASIC15.63■□□□□ 0.09
RIPK2O43353 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RIPK2O43353 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPK2O43353 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPK2O43353 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.63■□□□□ 0.09
RIPK2O43353 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RIPK2O43353 AL359881.3-201ENST00000602640 1721 ntBASIC15.63■□□□□ 0.09
RIPK2O43353 AC079781.5-202ENST00000641784 3743 ntBASIC15.63■□□□□ 0.09
RIPK2O43353 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RIPK2O43353 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.63■□□□□ 0.09
RIPK2O43353 AC011474.4-201ENST00000623523 2076 ntBASIC15.63■□□□□ 0.09
RIPK2O43353 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RIPK2O43353 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RIPK2O43353 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPK2O43353 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RIPK2O43353 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.63■□□□□ 0.09
RIPK2O43353 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
RIPK2O43353 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RIPK2O43353 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.63■□□□□ 0.09
RIPK2O43353 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.63■□□□□ 0.09
RIPK2O43353 RPL13AP23-201ENST00000480739 586 ntBASIC15.63■□□□□ 0.09
RIPK2O43353 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.63■□□□□ 0.09
RIPK2O43353 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RIPK2O43353 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.63■□□□□ 0.09
RIPK2O43353 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.63■□□□□ 0.09
RIPK2O43353 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RIPK2O43353 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RIPK2O43353 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.63■□□□□ 0.09
RIPK2O43353 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RIPK2O43353 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.63■□□□□ 0.09
RIPK2O43353 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.63■□□□□ 0.09
RIPK2O43353 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RIPK2O43353 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RIPK2O43353 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.63■□□□□ 0.09
RIPK2O43353 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPK2O43353 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.63■□□□□ 0.09
RIPK2O43353 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RIPK2O43353 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms