Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.09□□□□□ -0.63
PAX4O43316 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
PAX4O43316 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PAX4O43316 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PAX4O43316 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
PAX4O43316 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
PAX4O43316 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.09□□□□□ -0.63
PAX4O43316 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
PAX4O43316 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
PAX4O43316 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PAX4O43316 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PAX4O43316 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PAX4O43316 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PAX4O43316 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PAX4O43316 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PAX4O43316 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
PAX4O43316 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 AC087481.3-201ENST00000602886 1894 ntBASIC11.08□□□□□ -0.64
PAX4O43316 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 RNA5SP421-201ENST00000516864 134 ntBASIC11.08□□□□□ -0.64
PAX4O43316 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.08□□□□□ -0.64
PAX4O43316 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 AL512361.1-201ENST00000554200 418 ntBASIC11.08□□□□□ -0.64
PAX4O43316 AC010336.2-201ENST00000564226 506 ntBASIC11.08□□□□□ -0.64
PAX4O43316 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.08□□□□□ -0.64
PAX4O43316 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 AC097359.3-201ENST00000603982 1210 ntBASIC11.08□□□□□ -0.64
PAX4O43316 AC074044.1-201ENST00000609673 707 ntBASIC11.08□□□□□ -0.64
PAX4O43316 AL109936.8-201ENST00000641772 604 ntBASIC11.08□□□□□ -0.64
PAX4O43316 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
PAX4O43316 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.08□□□□□ -0.64
PAX4O43316 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.08□□□□□ -0.64
PAX4O43316 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.08□□□□□ -0.64
PAX4O43316 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms