Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC20.62■□□□□ 0.89
PER1O15534 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC20.62■□□□□ 0.89
PER1O15534 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PER1O15534 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC20.62■□□□□ 0.89
PER1O15534 CTBP2P5-201ENST00000454986 1264 ntBASIC20.62■□□□□ 0.89
PER1O15534 AL391280.1-201ENST00000506969 1062 ntBASIC20.62■□□□□ 0.89
PER1O15534 C2orf69P2-201ENST00000562032 1123 ntBASIC20.62■□□□□ 0.89
PER1O15534 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PER1O15534 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PER1O15534 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.62■□□□□ 0.89
PER1O15534 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PER1O15534 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PER1O15534 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC20.62■□□□□ 0.89
PER1O15534 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PER1O15534 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PER1O15534 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PER1O15534 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC20.61■□□□□ 0.89
PER1O15534 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PER1O15534 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PER1O15534 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC20.61■□□□□ 0.89
PER1O15534 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PER1O15534 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC20.61■□□□□ 0.89
PER1O15534 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PER1O15534 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC20.61■□□□□ 0.89
PER1O15534 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PER1O15534 AC018529.2-202ENST00000611482 3087 ntBASIC20.61■□□□□ 0.89
PER1O15534 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PER1O15534 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PER1O15534 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PER1O15534 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PER1O15534 SERF2-209ENST00000409646 559 ntTSL 4 BASIC20.61■□□□□ 0.89
PER1O15534 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.61■□□□□ 0.89
PER1O15534 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
PER1O15534 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PER1O15534 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PER1O15534 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC20.61■□□□□ 0.89
PER1O15534 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.61■□□□□ 0.89
PER1O15534 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.61■□□□□ 0.89
PER1O15534 AC106820.3-201ENST00000561653 397 ntBASIC20.61■□□□□ 0.89
PER1O15534 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.61■□□□□ 0.89
PER1O15534 AC138696.2-201ENST00000607376 223 ntBASIC20.61■□□□□ 0.89
PER1O15534 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.61■□□□□ 0.89
PER1O15534 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC20.61■□□□□ 0.89
PER1O15534 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PER1O15534 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC20.61■□□□□ 0.89
PER1O15534 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PER1O15534 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PER1O15534 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PER1O15534 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC20.61■□□□□ 0.89
PER1O15534 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PER1O15534 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PER1O15534 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC20.6■□□□□ 0.89
PER1O15534 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PER1O15534 LINC01101-201ENST00000622953 1884 ntBASIC20.6■□□□□ 0.89
PER1O15534 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PER1O15534 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC20.6■□□□□ 0.89
PER1O15534 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PER1O15534 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 CICP14-201ENST00000629111 2732 ntBASIC20.6■□□□□ 0.89
PER1O15534 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 AC099336.1-201ENST00000417053 1171 ntBASIC20.6■□□□□ 0.89
PER1O15534 GPR53P-205ENST00000457298 1084 ntBASIC20.6■□□□□ 0.89
PER1O15534 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
PER1O15534 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.6■□□□□ 0.89
PER1O15534 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.6■□□□□ 0.89
PER1O15534 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC20.6■□□□□ 0.89
PER1O15534 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.6■□□□□ 0.89
PER1O15534 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 AC103702.1-201ENST00000548801 2630 ntBASIC20.6■□□□□ 0.89
PER1O15534 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PER1O15534 RER1-203ENST00000378513 3000 ntTSL 3 BASIC20.6■□□□□ 0.89
PER1O15534 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PER1O15534 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC20.6■□□□□ 0.89
PER1O15534 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PER1O15534 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PER1O15534 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PER1O15534 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.59■□□□□ 0.89
PER1O15534 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PER1O15534 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PER1O15534 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PER1O15534 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC20.59■□□□□ 0.89
PER1O15534 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PER1O15534 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PER1O15534 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PER1O15534 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PER1O15534 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms