Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 MIR8072-201ENST00000614241 80 ntBASIC16.46■□□□□ 0.23
FOXN3O00409 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.46■□□□□ 0.23
FOXN3O00409 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXN3O00409 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXN3O00409 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
FOXN3O00409 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXN3O00409 LINC00552-201ENST00000625151 2579 ntBASIC16.46■□□□□ 0.23
FOXN3O00409 AL390755.1-201ENST00000623716 2027 ntBASIC16.46■□□□□ 0.23
FOXN3O00409 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
FOXN3O00409 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXN3O00409 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
FOXN3O00409 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXN3O00409 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXN3O00409 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXN3O00409 AC007787.1-201ENST00000588095 1583 ntBASIC16.46■□□□□ 0.23
FOXN3O00409 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
FOXN3O00409 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.46■□□□□ 0.22
FOXN3O00409 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
FOXN3O00409 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.46■□□□□ 0.22
FOXN3O00409 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
FOXN3O00409 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.46■□□□□ 0.22
FOXN3O00409 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.45■□□□□ 0.22
FOXN3O00409 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
FOXN3O00409 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
FOXN3O00409 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXN3O00409 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
FOXN3O00409 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
FOXN3O00409 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXN3O00409 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXN3O00409 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.45■□□□□ 0.22
FOXN3O00409 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 AC026410.3-201ENST00000514280 936 ntBASIC16.45■□□□□ 0.22
FOXN3O00409 RNA5SP421-201ENST00000516864 134 ntBASIC16.45■□□□□ 0.22
FOXN3O00409 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXN3O00409 AC036164.1-201ENST00000570544 333 ntBASIC16.45■□□□□ 0.22
FOXN3O00409 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.45■□□□□ 0.22
FOXN3O00409 AC027796.2-201ENST00000575326 344 ntBASIC16.45■□□□□ 0.22
FOXN3O00409 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXN3O00409 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
FOXN3O00409 AL157414.3-201ENST00000624276 1954 ntBASIC16.45■□□□□ 0.22
FOXN3O00409 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXN3O00409 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
FOXN3O00409 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXN3O00409 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
FOXN3O00409 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXN3O00409 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXN3O00409 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXN3O00409 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXN3O00409 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXN3O00409 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXN3O00409 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
FOXN3O00409 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXN3O00409 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
FOXN3O00409 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
FOXN3O00409 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
FOXN3O00409 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXN3O00409 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
FOXN3O00409 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
FOXN3O00409 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.44■□□□□ 0.22
FOXN3O00409 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.44■□□□□ 0.22
FOXN3O00409 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXN3O00409 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms