Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.24■□□□□ 0.03
TLR4O00206 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.24■□□□□ 0.03
TLR4O00206 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.24■□□□□ 0.03
TLR4O00206 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.24■□□□□ 0.03
TLR4O00206 AC114812.1-204ENST00000449669 728 ntBASIC15.24■□□□□ 0.03
TLR4O00206 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 RNA5SP486-201ENST00000515961 83 ntBASIC15.24■□□□□ 0.03
TLR4O00206 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.24■□□□□ 0.03
TLR4O00206 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.24■□□□□ 0.03
TLR4O00206 AC243960.2-201ENST00000600996 747 ntBASIC15.24■□□□□ 0.03
TLR4O00206 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.24■□□□□ 0.03
TLR4O00206 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.24■□□□□ 0.03
TLR4O00206 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
TLR4O00206 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.24■□□□□ 0.03
TLR4O00206 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.24■□□□□ 0.03
TLR4O00206 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
TLR4O00206 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
TLR4O00206 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TLR4O00206 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.24■□□□□ 0.03
TLR4O00206 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.24■□□□□ 0.03
TLR4O00206 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.24■□□□□ 0.03
TLR4O00206 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 MST1L-201ENST00000442552 2185 ntBASIC15.24■□□□□ 0.03
TLR4O00206 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TLR4O00206 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.23■□□□□ 0.03
TLR4O00206 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.23■□□□□ 0.03
TLR4O00206 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TLR4O00206 AC126177.1-201ENST00000547829 2218 ntBASIC15.23■□□□□ 0.03
TLR4O00206 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.23■□□□□ 0.03
TLR4O00206 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.23■□□□□ 0.03
TLR4O00206 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TLR4O00206 MIR326-201ENST00000362220 95 ntBASIC15.23■□□□□ 0.03
TLR4O00206 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.23■□□□□ 0.03
TLR4O00206 BCYRN1-201ENST00000418539 200 ntBASIC15.23■□□□□ 0.03
TLR4O00206 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.23■□□□□ 0.03
TLR4O00206 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.23■□□□□ 0.03
TLR4O00206 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TLR4O00206 AC099548.2-209ENST00000480264 625 ntBASIC15.23■□□□□ 0.03
TLR4O00206 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TLR4O00206 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.23■□□□□ 0.03
TLR4O00206 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.23■□□□□ 0.03
TLR4O00206 AC025181.2-201ENST00000606994 802 ntBASIC15.23■□□□□ 0.03
TLR4O00206 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.23■□□□□ 0.03
TLR4O00206 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TLR4O00206 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.23■□□□□ 0.03
TLR4O00206 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.23■□□□□ 0.03
TLR4O00206 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.23■□□□□ 0.03
TLR4O00206 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TLR4O00206 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.22■□□□□ 0.03
TLR4O00206 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TLR4O00206 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TLR4O00206 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TLR4O00206 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TLR4O00206 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TLR4O00206 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.22■□□□□ 0.03
TLR4O00206 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TLR4O00206 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.22■□□□□ 0.03
TLR4O00206 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TLR4O00206 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TLR4O00206 DBET-201ENST00000630918 3363 ntBASIC15.22■□□□□ 0.03
TLR4O00206 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TLR4O00206 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TLR4O00206 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TLR4O00206 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TLR4O00206 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.22■□□□□ 0.03
TLR4O00206 NUS1P3-201ENST00000423502 862 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms