Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.46□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC111170.3-201ENST00000624282 2464 ntBASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TSPY12P-201ENST00000421279 868 ntBASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SLC25A3P1-201ENST00000443844 931 ntBASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC034232.1-201ENST00000506026 1064 ntBASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC141257.4-201ENST00000634557 245 ntBASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC136944.6-201ENST00000634818 245 ntBASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC099521.2-201ENST00000619354 2036 ntBASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 KRT8P10-201ENST00000450021 1447 ntBASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 WASH3P-207ENST00000560956 1394 ntBASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 FO538757.1-201ENST00000623083 1397 ntBASIC13.45□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC107375.1-201ENST00000564464 2231 ntBASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms