Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 AL133267.1-201ENST00000398220 340 ntBASIC10.82□□□□□ -0.68
LINC01546A6NGU7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 NFIC-211ENST00000641145 8399 ntBASIC10.82□□□□□ -0.68
LINC01546A6NGU7 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 AC090643.2-201ENST00000623442 2029 ntBASIC10.81□□□□□ -0.68
LINC01546A6NGU7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 INIP-202ENST00000374236 874 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 MOK-208ENST00000519058 917 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 CLEC4GP1-201ENST00000596555 870 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms