Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LRCOL1A6NCL2 DKFZP434A062-201ENST00000573103 5021 ntBASIC10.4□□□□□ -0.74
LRCOL1A6NCL2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LRCOL1A6NCL2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LRCOL1A6NCL2 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
LRCOL1A6NCL2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LRCOL1A6NCL2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC10.4□□□□□ -0.75
LRCOL1A6NCL2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC10.4□□□□□ -0.75
LRCOL1A6NCL2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LRCOL1A6NCL2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
LRCOL1A6NCL2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
LRCOL1A6NCL2 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LRCOL1A6NCL2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 AC126335.2-201ENST00000623362 4637 ntBASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 CDC14C-201ENST00000428251 1719 ntBASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 AC069224.1-201ENST00000566372 1715 ntBASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 AC006449.5-201ENST00000610658 2098 ntBASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 GIMAP3P-201ENST00000495150 836 ntBASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 AC092552.1-201ENST00000547243 906 ntBASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 WFDC1-204ENST00000613603 549 ntBASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 TP73-201ENST00000346387 4854 ntTSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LRCOL1A6NCL2 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms