Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 AC092597.1-201ENST00000487352 616 ntBASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 AC140113.3-201ENST00000605663 199 ntBASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 AC010331.1-201ENST00000611423 582 ntBASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 MIR5787-201ENST00000611784 55 ntBASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 AC124864.1-201ENST00000623408 392 ntBASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 AC018442.1-201ENST00000421439 2061 ntBASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 AC018892.3-201ENST00000623986 2499 ntBASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 BEND3P3-201ENST00000611030 2440 ntBASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 AC004241.5-201ENST00000623870 2448 ntBASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 HCG4-201ENST00000418983 998 ntBASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 AC141257.4-201ENST00000634557 245 ntBASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 AC136944.6-201ENST00000634818 245 ntBASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.69□□□□□ -0.54
TRAPPC1Q9Y5R8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms