Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHB7Q9Y5E2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 SERPINA13P-202ENST00000478994 924 ntBASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 AC100850.1-201ENST00000506768 649 ntBASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 RNA5SP423-201ENST00000517127 109 ntBASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 AC138649.2-201ENST00000615886 705 ntBASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 TNRC18P3-201ENST00000441896 2691 ntBASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 CLUHP2-201ENST00000426660 1303 ntBASIC16.44■□□□□ 0.22
PCDHB7Q9Y5E2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 NKAIN1P1-201ENST00000435754 582 ntBASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 CHMP1AP1-201ENST00000445563 662 ntBASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 HIST2H2BB-201ENST00000449108 381 ntBASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 AC044849.1-201ENST00000519737 1188 ntBASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 AC138466.3-201ENST00000619983 221 ntBASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB7Q9Y5E2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDHB7Q9Y5E2 REXO1L5P-201ENST00000622260 2098 ntBASIC16.42■□□□□ 0.22
PCDHB7Q9Y5E2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
PCDHB7Q9Y5E2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB7Q9Y5E2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB7Q9Y5E2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDHB7Q9Y5E2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB7Q9Y5E2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB7Q9Y5E2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB7Q9Y5E2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms