Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 SPDYE11-202ENST00000450699 704 ntBASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 KRT8P23-201ENST00000560090 1207 ntBASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 AC243562.1-201ENST00000560672 389 ntBASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 SPDYE9P-201ENST00000570642 692 ntBASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 SLC25A6P4-201ENST00000586535 553 ntBASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 SPDYE10P-202ENST00000612005 668 ntBASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 SPDYE8P-202ENST00000612377 668 ntBASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 AP3S2-216ENST00000617003 1561 ntBASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 AC097359.2-201ENST00000604992 2389 ntBASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 ST20-AS1-201ENST00000560255 4223 ntBASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 AC136759.1-202ENST00000530858 2194 ntBASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 AC012508.2-201ENST00000567613 1472 ntBASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 AC138969.2-201ENST00000532739 9932 ntBASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 FO393414.2-201ENST00000405153 598 ntBASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 LBH-204ENST00000406087 559 ntTSL 4 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 ADH5P3-201ENST00000433842 1137 ntBASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms