Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RGS5-214ENST00000429865 754 ntTSL 3 BASIC20.42■□□□□ 0.86
NPC1L1Q9UHC9 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.42■□□□□ 0.86
NPC1L1Q9UHC9 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPC1L1Q9UHC9 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC20.42■□□□□ 0.86
NPC1L1Q9UHC9 GCOM2-201ENST00000509133 1104 ntBASIC20.42■□□□□ 0.86
NPC1L1Q9UHC9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC20.42■□□□□ 0.86
NPC1L1Q9UHC9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC20.42■□□□□ 0.86
NPC1L1Q9UHC9 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC20.42■□□□□ 0.86
NPC1L1Q9UHC9 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPC1L1Q9UHC9 AHCYP2-201ENST00000430630 1300 ntBASIC20.42■□□□□ 0.86
NPC1L1Q9UHC9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 AL136309.1-201ENST00000403917 691 ntBASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 FAM8A4P-201ENST00000435433 1213 ntBASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPC1L1Q9UHC9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 MIR658-201ENST00000385210 100 ntBASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 MPV17-205ENST00000402310 906 ntTSL 5 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 RNA5SP412-201ENST00000516234 123 ntBASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 AC133552.6-201ENST00000613406 534 ntBASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 AC018442.1-201ENST00000421439 2061 ntBASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NPC1L1Q9UHC9 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NPC1L1Q9UHC9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
NPC1L1Q9UHC9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
NPC1L1Q9UHC9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NPC1L1Q9UHC9 HYMAI-201ENST00000635591 3347 ntBASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 CHMP1AP1-201ENST00000445563 662 ntBASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 OR10B1P-201ENST00000601666 907 ntBASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 BX088702.1-201ENST00000610784 235 ntBASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 ZACNP1-201ENST00000612259 710 ntBASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NPC1L1Q9UHC9 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms