Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.22■□□□□ 0.03
NCDNQ9UBB6 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 AC020922.3-201ENST00000595064 547 ntBASIC15.22■□□□□ 0.03
NCDNQ9UBB6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 ZACNP1-201ENST00000612259 710 ntBASIC15.22■□□□□ 0.03
NCDNQ9UBB6 AC103691.2-201ENST00000618824 433 ntBASIC15.22■□□□□ 0.03
NCDNQ9UBB6 AP001002.3-201ENST00000623482 206 ntBASIC15.22■□□□□ 0.03
NCDNQ9UBB6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 AL592424.1-201ENST00000563624 1536 ntBASIC15.22■□□□□ 0.03
NCDNQ9UBB6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 KRT8P4-201ENST00000509735 1454 ntBASIC15.21■□□□□ 0.03
NCDNQ9UBB6 AP001282.1-201ENST00000531301 1499 ntBASIC15.21■□□□□ 0.03
NCDNQ9UBB6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 CICP6-201ENST00000457191 2729 ntBASIC15.21■□□□□ 0.03
NCDNQ9UBB6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 AC026316.1-201ENST00000398900 414 ntBASIC15.21■□□□□ 0.03
NCDNQ9UBB6 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 RPSAP31-201ENST00000416648 895 ntBASIC15.21■□□□□ 0.03
NCDNQ9UBB6 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 AL354877.1-201ENST00000424412 413 ntBASIC15.21■□□□□ 0.03
NCDNQ9UBB6 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.21■□□□□ 0.03
NCDNQ9UBB6 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 KRT18P66-201ENST00000452970 1269 ntBASIC15.21■□□□□ 0.03
NCDNQ9UBB6 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 RN7SL713P-201ENST00000582127 302 ntBASIC15.21■□□□□ 0.03
NCDNQ9UBB6 AF254983.2-201ENST00000612331 135 ntBASIC15.21■□□□□ 0.03
NCDNQ9UBB6 AL805961.1-201ENST00000642026 753 ntBASIC15.21■□□□□ 0.03
NCDNQ9UBB6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 CYP2T1P-202ENST00000641596 2535 ntBASIC15.21■□□□□ 0.03
NCDNQ9UBB6 AL157791.1-201ENST00000553667 1699 ntBASIC15.21■□□□□ 0.03
NCDNQ9UBB6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.21■□□□□ 0.03
NCDNQ9UBB6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NCDNQ9UBB6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.21■□□□□ 0.02
NCDNQ9UBB6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
NCDNQ9UBB6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NCDNQ9UBB6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NCDNQ9UBB6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
NCDNQ9UBB6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.21■□□□□ 0.02
NCDNQ9UBB6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCDNQ9UBB6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NCDNQ9UBB6 AC025271.4-201ENST00000621477 1726 ntBASIC15.2■□□□□ 0.02
NCDNQ9UBB6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCDNQ9UBB6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCDNQ9UBB6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.2■□□□□ 0.02
NCDNQ9UBB6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NCDNQ9UBB6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCDNQ9UBB6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCDNQ9UBB6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCDNQ9UBB6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCDNQ9UBB6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.2■□□□□ 0.02
NCDNQ9UBB6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
NCDNQ9UBB6 AL391005.1-201ENST00000623953 2435 ntBASIC15.2■□□□□ 0.02
NCDNQ9UBB6 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCDNQ9UBB6 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCDNQ9UBB6 DPM3-202ENST00000368399 517 ntBASIC15.2■□□□□ 0.02
NCDNQ9UBB6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms