Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 LINC01230-201ENST00000625222 3017 ntBASIC15.19■□□□□ 0.02
MKS1Q9NXB0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 AL360270.3-201ENST00000609118 1348 ntBASIC15.18■□□□□ 0.02
MKS1Q9NXB0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 AL627223.1-201ENST00000416693 442 ntBASIC15.18■□□□□ 0.02
MKS1Q9NXB0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 AC005237.2-201ENST00000434368 219 ntBASIC15.18■□□□□ 0.02
MKS1Q9NXB0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 AC000095.1-201ENST00000603208 874 ntBASIC15.18■□□□□ 0.02
MKS1Q9NXB0 AL513210.1-201ENST00000629608 234 ntBASIC15.18■□□□□ 0.02
MKS1Q9NXB0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.18■□□□□ 0.02
MKS1Q9NXB0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 AC011474.4-201ENST00000623523 2076 ntBASIC15.18■□□□□ 0.02
MKS1Q9NXB0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MKS1Q9NXB0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 MBLAC2-202ENST00000514906 1936 ntBASIC15.17■□□□□ 0.02
MKS1Q9NXB0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 AL354702.1-201ENST00000442006 1960 ntBASIC15.17■□□□□ 0.02
MKS1Q9NXB0 AC068587.6-202ENST00000641839 5619 ntBASIC15.17■□□□□ 0.02
MKS1Q9NXB0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 AC018665.1-201ENST00000622927 1362 ntBASIC15.17■□□□□ 0.02
MKS1Q9NXB0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.17■□□□□ 0.02
MKS1Q9NXB0 MTND6P24-201ENST00000440466 518 ntBASIC15.17■□□□□ 0.02
MKS1Q9NXB0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms