Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC093433.1-201ENST00000458048 571 ntBASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 AL358472.5-202ENST00000641448 1267 ntBASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 AC105233.6-201ENST00000642093 218 ntBASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
ECHDC1Q9NTX5 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 RN7SL837P-201ENST00000463010 287 ntBASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 AC010319.3-201ENST00000597028 470 ntBASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 AP005019.2-201ENST00000615104 511 ntBASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC1Q9NTX5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.67■□□□□ 0.58
ECHDC1Q9NTX5 ACTG1P3-201ENST00000431775 1114 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms