Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CBX8Q9HC52 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.22■□□□□ 0.35
CBX8Q9HC52 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CBX8Q9HC52 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 AL137784.3-201ENST00000623858 2288 ntBASIC17.22■□□□□ 0.35
CBX8Q9HC52 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX8Q9HC52 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX8Q9HC52 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 AC104457.1-201ENST00000401024 814 ntBASIC17.21■□□□□ 0.35
CBX8Q9HC52 FO393414.2-201ENST00000405153 598 ntBASIC17.21■□□□□ 0.35
CBX8Q9HC52 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 SPDYE11-202ENST00000450699 704 ntBASIC17.21■□□□□ 0.35
CBX8Q9HC52 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 IGHV3-62-201ENST00000520057 340 ntBASIC17.21■□□□□ 0.35
CBX8Q9HC52 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 SPDYE9P-201ENST00000570642 692 ntBASIC17.21■□□□□ 0.35
CBX8Q9HC52 AC015910.1-201ENST00000579400 975 ntBASIC17.21■□□□□ 0.35
CBX8Q9HC52 AC026120.1-201ENST00000611536 926 ntBASIC17.21■□□□□ 0.35
CBX8Q9HC52 SPDYE10P-202ENST00000612005 668 ntBASIC17.21■□□□□ 0.35
CBX8Q9HC52 SPDYE8P-202ENST00000612377 668 ntBASIC17.21■□□□□ 0.35
CBX8Q9HC52 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 AC084121.4-201ENST00000641598 221 ntBASIC17.21■□□□□ 0.35
CBX8Q9HC52 AF228730.8-201ENST00000642140 221 ntBASIC17.21■□□□□ 0.35
CBX8Q9HC52 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CBX8Q9HC52 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX8Q9HC52 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CBX8Q9HC52 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
CBX8Q9HC52 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.21■□□□□ 0.34
CBX8Q9HC52 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CBX8Q9HC52 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 AC007787.1-201ENST00000588095 1583 ntBASIC17.2■□□□□ 0.34
CBX8Q9HC52 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 FAM58CP-201ENST00000435741 640 ntBASIC17.2■□□□□ 0.34
CBX8Q9HC52 RPL13AP23-201ENST00000480739 586 ntBASIC17.2■□□□□ 0.34
CBX8Q9HC52 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms