Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 AL354989.2-201ENST00000435838 1540 ntBASIC17.88■□□□□ 0.45
SH2D4AQ9H788 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 FAM86HP-204ENST00000513466 959 ntBASIC17.88■□□□□ 0.45
SH2D4AQ9H788 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 ECM1P1-201ENST00000604092 1279 ntBASIC17.88■□□□□ 0.45
SH2D4AQ9H788 AC091271.1-201ENST00000611877 1162 ntBASIC17.88■□□□□ 0.45
SH2D4AQ9H788 ENPP7P14-201ENST00000621765 1040 ntBASIC17.88■□□□□ 0.45
SH2D4AQ9H788 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH2D4AQ9H788 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 AC108725.1-201ENST00000495472 409 ntBASIC17.87■□□□□ 0.45
SH2D4AQ9H788 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 AC022616.1-201ENST00000518688 554 ntBASIC17.87■□□□□ 0.45
SH2D4AQ9H788 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 KRT8P44-201ENST00000441609 1350 ntBASIC17.87■□□□□ 0.45
SH2D4AQ9H788 AC020907.1-201ENST00000616460 1350 ntBASIC17.87■□□□□ 0.45
SH2D4AQ9H788 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH2D4AQ9H788 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SH2D4AQ9H788 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH2D4AQ9H788 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH2D4AQ9H788 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.86■□□□□ 0.45
SH2D4AQ9H788 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH2D4AQ9H788 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
SH2D4AQ9H788 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SH2D4AQ9H788 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SH2D4AQ9H788 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH2D4AQ9H788 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms