Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.25□□□□□ -0.77
LITAFQ99732 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC10.25□□□□□ -0.77
LITAFQ99732 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC10.25□□□□□ -0.77
LITAFQ99732 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
LITAFQ99732 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
LITAFQ99732 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.25□□□□□ -0.77
LITAFQ99732 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
LITAFQ99732 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC10.24□□□□□ -0.77
LITAFQ99732 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC10.24□□□□□ -0.77
LITAFQ99732 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC10.24□□□□□ -0.77
LITAFQ99732 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
LITAFQ99732 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC10.24□□□□□ -0.77
LITAFQ99732 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC10.24□□□□□ -0.77
LITAFQ99732 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 DDT-204ENST00000404092 805 ntTSL 3 BASIC10.24□□□□□ -0.77
LITAFQ99732 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC10.24□□□□□ -0.77
LITAFQ99732 RAB17-203ENST00000409576 466 ntTSL 3 BASIC10.24□□□□□ -0.77
LITAFQ99732 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC10.24□□□□□ -0.77
LITAFQ99732 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC10.24□□□□□ -0.77
LITAFQ99732 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
LITAFQ99732 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC10.24□□□□□ -0.77
LITAFQ99732 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
LITAFQ99732 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC10.24□□□□□ -0.77
LITAFQ99732 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC10.24□□□□□ -0.77
LITAFQ99732 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC10.24□□□□□ -0.77
LITAFQ99732 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC10.24□□□□□ -0.77
LITAFQ99732 PAM16-208ENST00000573553 722 ntTSL 2 BASIC10.24□□□□□ -0.77
LITAFQ99732 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC10.24□□□□□ -0.77
LITAFQ99732 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC10.24□□□□□ -0.77
LITAFQ99732 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC10.24□□□□□ -0.77
LITAFQ99732 AL732292.2-201ENST00000609649 430 ntBASIC10.24□□□□□ -0.77
LITAFQ99732 AC116407.4-201ENST00000623319 1061 ntBASIC10.24□□□□□ -0.77
LITAFQ99732 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
LITAFQ99732 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.24□□□□□ -0.77
LITAFQ99732 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC10.24□□□□□ -0.77
LITAFQ99732 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
LITAFQ99732 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.24□□□□□ -0.77
LITAFQ99732 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC10.24□□□□□ -0.77
LITAFQ99732 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
LITAFQ99732 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
LITAFQ99732 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
LITAFQ99732 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC10.24□□□□□ -0.77
LITAFQ99732 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms